DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Spn85F

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster


Alignment Length:596 Identity:96/596 - (16%)
Similarity:163/596 - (27%) Gaps:248/596 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PPPNRPPPVFSYMDRFSSEL-FKEIIKSQ--------------------SQQNVVFSPFSVHALL 138
            |.|:.|||..:.:|.....| .||:..::                    ::.|..|||.::.::|
  Fly    36 PHPHFPPPPLTPLDHLPQVLAAKELTPAEVMVDLTNDLTHRLLHYHSILNRNNFAFSPTALVSVL 100

  Fly   139 ALIYGASDGKTFRELQ----------------------------------KAGEFSKNAMAVAQD 169
            ..::..|.|.|..||:                                  |....:|..:.|.:|
  Fly   101 VALFEGSAGNTAEELRHVLQLPNNRDVTRVGYRDIHRRLRTYFFGSDNPLKGLSLNKGNVTVLKD 165

  Fly   170 FESVIKYKKHLEGADLTLATKVYYNRELGGVN-----------------------HSYDEYA--- 208
            ||:|:.:..:....|:..:|......:...||                       .:.:|.|   
  Fly   166 FETVLMFYGYDLSVDMLSSTPANLTSDAELVNTTMASNTTTMEMDAETTTSKDAESTTEEPATTT 230

  Fly   209 ------------------KFYFSAGTEAVDMQNAKDTAAK----------INAWVMD-------- 237
                              .....|.|||....:.::.||:          ::|:|.:        
  Fly   231 TEPPATTTAEPPTTTTETPAETEATTEAPAATSGEEEAAEPAGEDEAAELVSAFVAEEDSEPLLR 295

  Fly   238 ----------------------------------------------------------------- 237
                                                                             
  Fly   296 IQKARVSRLPTSKLQAPLKHSNPITPKPIYLPSARTVAMPMPMMARQVAERKPPGTRQVISIIAP 360

  Fly   238 --------------TTRNKIRDLVTPTDVDPQTQALLVN--------AVYFQGRWEHEFA--TMD 278
                          |.|.|...:....|:|......|.|        .::|.......||  |.|
  Fly   361 SVQPANISVTRKTKTARYKRHAIPAYKDLDANLFLTLFNPHTHVPHHPLHFPPPVPAAFAPITND 425

  Fly   279 TSPYDFQHTNGRISKVAMMFNDDV-------------------------YGLAELPELGATALEL 318
            ..|    |..|..::....:|.||                         |...|  .|..:.|||
  Fly   426 FEP----HYIGEAAEGKSNYNTDVISHVFYLGNQQVVHTTFKVYNAVLYYKYFE--HLKMSVLEL 484

  Fly   319 AYKDSATSMLILLPNETTGLGKMLQQLS-RPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEP 382
            .......:::||||:..|.:......|. .|...|.|  .:|:.:.|...:|.|:......:|..
  Fly   485 ELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMR--KQLKPRWVQAIIPDFKLHGTMFLTND 547

  Fly   383 LKNLGVHQMFTPNSQVTKLM--DQPVRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTE 445
            |:|:|:..:|.||....:.|  ::.|.|..|.|...:.:..........:|      ....||.:
  Fly   548 LQNMGICDVFEPNRADFRPMTEEKGVYVRHIEQSIDVTIRTHPINQLKRNY------GAQSKPIQ 606

  Fly   446 FVANRPFVFAV 456
            ...|.||:|.:
  Fly   607 ISVNHPFLFFI 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 91/583 (16%)
Spn85FNP_649965.2 SERPIN 88..>204 CDD:294093 21/115 (18%)
SERPIN <450..634 CDD:294093 38/178 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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