DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpinb6b

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:398 Identity:110/398 - (27%)
Similarity:188/398 - (47%) Gaps:40/398 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PVFSYMDRFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSK----N 162
            |:......|:..|.| .:...|.:||:|||.|:.:.||:::..:.|.|..::.:|....|    .
  Rat     3 PLLEANGTFAFNLLK-TLGEDSSKNVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSLDKCSGRG 66

  Fly   163 AMAVAQDFESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKF------YFSAGTEAVDM 221
            :..|.|.|:|::. |.:..|....|.|.   ||..|  ..::|..|.|      ::.|..|.:|.
  Rat    67 SRDVHQGFQSLLA-KVNKTGTQYLLKTA---NRLFG--EKTFDILASFKDACRKFYEAEMEELDF 125

  Fly   222 QNAKDTAAK-INAWVMDTT-----------RNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEF 274
            :.|.:.:.: ||.||...|           :.||.:|::...|:..|..:||||:||:|.|:.:|
  Rat   126 KGAPEQSRQHINTWVAKKTEGQSISLNWNSQKKITELLSSGSVNANTPLVLVNAIYFKGNWKKQF 190

  Fly   275 ATMDTSPYDFQHTNGRISKVAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLG 339
            ...||....|:.|......|.|||....:.:..:.|:..|.|.|.|..:..:|:|:||:|...|.
  Rat   191 NKEDTQEMPFKVTKNEEKPVKMMFKKSTFKMTYVEEISTTILLLPYVGNELNMIIMLPDEHIELR 255

  Fly   340 KMLQQLSRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPN----SQVTK 400
            .:.::::..:|.......::..:.|.|.||||:.|...||.:.|..||:...|...    |.:..
  Rat   256 MVEKEITYKKFIEWTSLDKMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADFSGIAS 320

  Fly   401 LMDQPVRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVRTPAS--VL 463
              .:.:.:||::.|:::.|.|.||||:||:.|......:.|   .|.||.||:|.::...:  ::
  Rat   321 --KEGLFLSKVIHKSFVEVNEEGTEAAAATAANVTFRCMVP---YFCANHPFLFFIQHSRTNGIV 380

  Fly   464 FIGHVEYP 471
            |.|....|
  Rat   381 FCGRFSSP 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 108/387 (28%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 109/396 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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