DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and serpind1

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_878300.1 Gene:serpind1 / 359841 ZFINID:ZDB-GENE-030711-2 Length:507 Species:Danio rerio


Alignment Length:442 Identity:115/442 - (26%)
Similarity:195/442 - (44%) Gaps:63/442 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PRPELGLRSLPGNPWTQ--------NNQEAISDVVAVDLTKREPVTPPPNRPPPVFSYMDRFSSE 113
            |.|:|.|...|.:|..:        :.|..:..:..|:.                     ||...
Zfish   101 PAPDLDLFYEPSDPKIRRARLLRLFHGQTRLQRINVVNA---------------------RFGFR 144

  Fly   114 LFKEIIKSQSQ-QNVVFSPFSVHALLALIYGASDGKTFRE--LQKAG--EFSKNAMAVAQDFESV 173
            |::::....:| .|::.:|..:...:.:: |...|...:|  .|..|  || .|| :...|..:|
Zfish   145 LYRKLRNRLNQTDNILLAPVGISIAMGMM-GLGVGPNTQEQLFQTVGFAEF-VNA-SNHYDNSTV 206

  Fly   174 IKYKKHLE--------GADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTA-- 228
            .|..:.|.        |..|.....:|..|.: .:..|:...||.|:.|..::||.   .|.|  
Zfish   207 HKLFRKLTHRLFRRNFGYTLRSVNDLYVKRNV-QIQDSFRADAKTYYFAEPQSVDF---ADPAFL 267

  Fly   229 AKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISK 293
            .|.|..:...|:..|::.:  ..|||....:|:|.:||:|.||.:|....|....|:....:..:
Zfish   268 VKANQRIQKITKGLIKEPL--KSVDPNMAVMLLNYLYFKGTWEQKFPKELTHHRQFRVNEKKQVR 330

  Fly   294 VAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHR 358
            |.||.|...|..|...||....|:|.|..: .||||.:|.:.:|:..:.|::| |.. :|:....
Zfish   331 VLMMQNKGSYLAAADHELNCDILQLPYAGN-ISMLIAVPQKLSGMRSLEQEIS-PTL-VNKWLSN 392

  Fly   359 LRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQPVRVSKILQKAYINVGEAG 423
            :..::..|..|:|:.|...|:.|.||.:|:..:||.....:.:..:.|.::....:..|.|.|.|
Zfish   393 MTNRTREVVFPRFKLEQNYDLIEHLKEMGMTDIFTEKGDFSPMTSEKVIINWFKHQGSITVNEEG 457

  Fly   424 TEASAASYAKFVPLSLPPKPTEFVANRPFVFAV---RTPASVLFIGHVEYPT 472
            |||:|.::..|:|||   ..|.|:.:|||:|.:   || ..|:|:|.|..|:
Zfish   458 TEAAAMTHIGFMPLS---TQTRFIVDRPFLFLIYEHRT-GCVVFMGRVVDPS 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 105/377 (28%)
serpind1NP_878300.1 HCII 61..505 CDD:239002 114/440 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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