DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Spn42Db

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster


Alignment Length:370 Identity:108/370 - (29%)
Similarity:201/370 - (54%) Gaps:16/370 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 MDRFSSELFKEIIKSQSQQNVVFSPFSVHALLALI-YGASDGK-TFRELQKAGEF-SKNAMAVAQ 168
            :::|:..|...:.::.:..|:::||.|:|...|:: .|.|:|. |.:|:.:...| ...|..||:
  Fly    10 LEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQVAE 74

  Fly   169 DFESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINA 233
            .|..|:|..:..:  .|.:|..:|..:.| .|:..:....:..|.:....:|. .::..|:.||.
  Fly    75 SFGVVLKSYEQCQ--VLKMANGLYVMKGL-QVDEQFGHILEQKFRSKPMEIDF-GSEQAASIINK 135

  Fly   234 WVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMF 298
            ||...|.|.|:|::.|..:...::..|||.::|:|.|...|...:|...|| ..:.|.::|.||.
  Fly   136 WVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDF-FGSDRPTRVRMMH 199

  Fly   299 NDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQS 363
            ..:.:..|.||...||||.:.|.....:|:||||:|.:.|..:.::||  :..|..|:..:..:.
  Fly   200 VCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLS--DISLEVVSSAMNLEK 262

  Fly   364 VAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLM--DQPVRVSKILQKAYINVGEAGTEA 426
            |.|::|.|..||:|::::.|..:|::::|:..:::..::  ::.:.||:|:.||:|.:.|.||||
  Fly   263 VDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEA 327

  Fly   427 SAASYAKFVPLSLPPK---PTEFVANRPFVFAVR-TPASVLFIGH 467
            :||:.|.....|:|.:   |..|.|||||.:|:: ....:||.||
  Fly   328 AAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTHGLLFAGH 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 108/369 (29%)
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 108/368 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449390
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7631
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
98.800

Return to query results.
Submit another query.