DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Spn28Da

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:377 Identity:107/377 - (28%)
Similarity:197/377 - (52%) Gaps:18/377 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SYMDRFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQD 169
            |.:.:|:.:|::..::...|.|::.||..|...:::|...:||.|..||:.|....::...||..
  Fly    12 SVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATI 76

  Fly   170 FESVI-KYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINA 233
            ::.:: |.::..:.|.|.||.:::.|..: |||..|::....:|.|..||:.:.:....|..||.
  Fly    77 YDKLLTKLERGKKVAILHLANRLFVNETI-GVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAIND 140

  Fly   234 WVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMF 298
            ||:|.|.:.::|::.|:|:.|...|:::||.:|:|.|:..|..|:|.|..|..:......|.||.
  Fly   141 WVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMS 205

  Fly   299 NDDVYGL--AELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQL-SRPEFDLNRVAHRLR 360
            ....:.:  :.:.::    :||.:..|..||:|:||.:...|.:....: |.|:..|..:     
  Fly   206 QVGRFKMRTSTIDQI----IELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTEM----- 261

  Fly   361 RQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQP-VRVSKILQKAYINVGEAGT 424
              .|.|:||||:.:|..::.|.||::|:..:|..:|.::.|::|. .|:|:::.||:|.:.|.|.
  Fly   262 --DVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEGG 324

  Fly   425 EASAASYAKFVPLS-LPPKPTEFVANRPFVFAVRTPASVLFIGHVEYPTPMS 475
            .|.:||.:....|| .......|..|.||||.:|...::.|.|.|..|...|
  Fly   325 SAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVDPLKKS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 105/371 (28%)
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 105/371 (28%)

Return to query results.
Submit another query.