DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Spn28B

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster


Alignment Length:367 Identity:115/367 - (31%)
Similarity:203/367 - (55%) Gaps:17/367 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 ELFKEIIKSQ-SQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVIKY 176
            |.|..|:.|| :::|:::||.|...:::::|.||.||||.||:...:||:|...||.::.|::..
  Fly    19 EDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRSLLSD 83

  Fly   177 KKHLEG-ADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMDTTR 240
            .|..|. ..|.:|.::|.|::...| ..:::.|:..|.|..:::.:.:....:|.:|:|:::.||
  Fly    84 LKRRETFIILHMANRIYVNKKYCLV-PEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTR 147

  Fly   241 NKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFNDDVYGL 305
            ..||::|.|.|.:..|.|.||||:||:|:|.:.|....|...||..:...|..|.||........
  Fly   148 GMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLS 212

  Fly   306 AELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQSVAVRLPK 370
            ..:.::.|..:||.|.:|..||.|:|||...||.|:.::       :..:.:.|.::||.|:|||
  Fly   213 GYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEK-------VGFIDYHLEKKSVNVKLPK 270

  Fly   371 FQFEFEQDMTEPLKNLGVHQMFTPNSQVTKL-MDQPVRVSKILQKAYINVGEAGTEASAAS---- 430
            |:.|.:..:....:|||:..:|.|::.:..| ::...::.||:|||::.:.|.|.|||||:    
  Fly   271 FKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLT 335

  Fly   431 -YAKFVPLSLPPKPTEFVANRPFVFAVRTPASVLFIGHVEYP 471
             ..|.:...:.| |.||:|:.||.:.:.....:.|.||:..|
  Fly   336 RRKKSIDNLIQP-PMEFIADHPFFYVIHDNKVIYFQGHIVEP 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 113/362 (31%)
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 113/362 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446375
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
87.850

Return to query results.
Submit another query.