DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpina1f

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001101524.1 Gene:Serpina1f / 314406 RGDID:1307899 Length:412 Species:Rattus norvegicus


Alignment Length:423 Identity:84/423 - (19%)
Similarity:182/423 - (43%) Gaps:64/423 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VVAVDLTKREPVTPPPNRPP----PVFSYMDRFSSELFKEIIKSQSQQNVVFSPFSVHALLALIY 142
            ::.:..||.|.:...||..|    .|...:...|..||||:.:.....|::|||..|.|.::::.
  Rat    19 LLPITKTKYEDLYEDPNIDPFQCRKVALTISNISITLFKEMAQLSVNGNILFSPIRVIAAISMLS 83

  Fly   143 GASDGKTFRELQKAGEFSKNAMAVAQDFESVIKYKKHL--------EGADLTLATKVYYNRELGG 199
            ..:.|...:.:.:....:|..:..|:    :.|..::|        :.:.|...:.|:.:::|..
  Rat    84 LGAKGNESKRILEILRLNKTGLPEAE----IHKCFRYLLRAIHQPEQLSPLKSGSGVFIHQDLTP 144

  Fly   200 VNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAV 264
            |: .:.|..|..:.:...:::..:.:....:||.::|..:..:|:::|  .:::..|...:||.:
  Rat   145 VD-KFVEGVKNLYHSDIVSINFTDCRRAKTQINNYMMTKSNKEIKNIV--KNLENDTYMAVVNYI 206

  Fly   265 YFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFNDDVYGLAELPELGATALELAYKDSATSMLI 329
            .:..:...:|........|:....|...||.|:...|:..|..:.:|.:|.|......|..:...
  Rat   207 IWNAKINSDFGCRSVKQKDYHLEQGMTIKVPMIHIVDLNHLFRVEDLSSTVLVFTLLASNFTTYF 271

  Fly   330 LLPNETTGLGKML---QQLSRPEFDLNRVAHRLRRQS----VAVRLPKFQFEFEQDMTEPLKNLG 387
            ::|:    :|:|.   |:|:.|.|      .|:||||    |.:..|:.......|:...:..||
  Rat   272 IIPD----IGQMQKVEQRLTYPHF------RRMRRQSNLRMVNLETPELSLSETHDVESMMNLLG 326

  Fly   388 VHQMFTPNSQVTKLMDQPVRVS-KILQKAYINVGEAGTEASAAS-----------YAKFVPLSLP 440
            :..:|..::..:.:|:..::.| |::.|..:.:.:.|::...::           |.:|      
  Rat   327 ITYVFNNDANSSAVMNDTLQKSFKMVSKVKLTIDDKGSKPGRSTCFKNDGSVDVGYVQF------ 385

  Fly   441 PKPTEFVANRPFVFAVRTPAS--VLFIGHVEYP 471
                    ||||:..::.|.:  .||:|.|..|
  Rat   386 --------NRPFLIFIKDPTNDVPLFLGRVVNP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 76/394 (19%)
Serpina1fNP_001101524.1 serpin 47..410 CDD:476815 76/393 (19%)

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