DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpinc1

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:440 Identity:107/440 - (24%)
Similarity:208/440 - (47%) Gaps:36/440 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NPRPELGL---RSLPGNPW-------TQNNQEAISDVVAVDLTKREPVTPPPNRPPPVFSYMDRF 110
            ||..::.:   |.:|.||.       .:..:|.:.:....:.|.|        |...:.....||
  Rat    35 NPVDDICIAKPRDIPVNPMCIYRSPAKKATEEDVLEQKVPEATNR--------RVWELSKANSRF 91

  Fly   111 SSELFKEIIKSQS-QQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVI 174
            ::..::.:..|:: ..|:..||.|:....|:....:...|.::|.:..:|...:...:.......
  Rat    92 ATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTLKQLMEVFKFDTISEKTSDQIHFFF 156

  Fly   175 K------YKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDM-QNAKDTAAKIN 232
            .      |:|..:.::|..|.:::.::.| ..|.||.:.::..:.|..:.:|. :|.:.:...||
  Rat   157 AKLNCRLYRKANKSSNLVSANRLFGDKSL-TFNESYQDVSEIVYGAKLQPLDFKENPEQSRVTIN 220

  Fly   233 AWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMM 297
            .||.:.|..:|:|::....:|..|..:|||.:||:|.|:.:|:..:|....|...:|:...|.||
  Rat   221 NWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEPFHKVDGQSCLVPMM 285

  Fly   298 FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQ 362
            :.:..:....:.| |...||:.:|....:|:::||.....|.|:.|:|: ||. |......|...
  Rat   286 YQEGKFKYRRVGE-GTQVLEMPFKGDDITMVLILPKPEKSLAKVEQELT-PEL-LQEWLDELSEV 347

  Fly   363 SVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTP-NSQVTKLMDQ---PVRVSKILQKAYINVGEAG 423
            .:.|.:|:|:.|....:.|.|:::|:..:|:| .||:..::.:   .:.||....||::.|.|.|
  Rat   348 MLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEGRDDLFVSDAFHKAFLEVNEEG 412

  Fly   424 TEASAASYAKFVPLSLPPKPTEFVANRPFVFAVRTPA--SVLFIGHVEYP 471
            :||:|::.......||.|....|.|||||:..:|..|  :::|:|.|..|
  Rat   413 SEAAASTSVVITGRSLNPSRVTFKANRPFLVLIREVALNTIIFMGRVSNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 95/373 (25%)
Serpinc1NP_001012027.1 antithrombin-III_like 80..459 CDD:239000 96/382 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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