DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpinb3

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:387 Identity:113/387 - (29%)
Similarity:189/387 - (48%) Gaps:33/387 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMA-------- 165
            :|:.||::::  ..|:.|:.:||.|:...||::...:.|.|.::::||.:.|:....        
  Rat    10 QFTLELYRQL--RDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKSADS 72

  Fly   166 -----VAQDFESVIKYKKHLEGA-DLTLATKVYYNRELGGVN-----HSYDEYAKFYFSAGTEAV 219
                 |.:.|..::.......|| ||.....:|      |..     .::.|..|.|:.|..|::
  Rat    73 HDEENVHEQFRKIMNQLNKSNGAYDLKSPNSIY------GAKGFPFLQTFMEDIKKYYQANVESL 131

  Fly   220 DMQN-AKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYD 283
            |..: |:::..|||:||.:.|..||:||.....::..|..:|||||||:|:|.|:|....|....
  Rat   132 DFAHAAEESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTREDK 196

  Fly   284 FQHTNGRISKVAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRP 348
            |.........|.||...:.:....|.::.|..:|:.||....||.||||.|..||.|:.::||..
  Rat   197 FWLNKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLSAD 261

  Fly   349 EFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD--QPVRVSKI 411
            ..........:|...:.:.||:|:.:.:.|:..||:::|:...|.|.......|.  :.:.|||:
  Rat   262 TLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGMSSTKGLVVSKV 326

  Fly   412 LQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVR--TPASVLFIGHVEYP 471
            |.|:::.|.|.|.||:||:..:...|| .|:.|||..||||:..::  ...|:||.|.|..|
  Rat   327 LHKSFLEVNEEGAEAAAATGVETRILS-APRTTEFTCNRPFIVFIKPNNTNSILFFGRVSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 111/382 (29%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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