DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpina3m

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:388 Identity:108/388 - (27%)
Similarity:186/388 - (47%) Gaps:51/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVI 174
            |:..|:|.:......:||||||.|:.|.||::...:.|.|..|:.:...|:     :.:.:|:.|
  Rat    54 FAFSLYKMLALKNPDKNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFN-----LTESYETDI 113

  Fly   175 KYK-KHL------EGADLTLAT--KVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAK 230
            ... .||      .|..:.:.|  .::.::.| .|...:.|..:..:.......|.|..:.|...
  Rat   114 HQGFGHLLQRLSQPGDQVKIITGNALFIDKNL-QVLAEFQEKTRALYQVEAFTADFQQPRVTEKL 177

  Fly   231 INAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVA 295
            ||.:|.:.|:.||::||  :.:..:|..:|||.:.|:|:|:..|....|...:|.....|..||:
  Rat   178 INDYVRNQTQGKIQELV--SGLKERTSMVLVNYLLFRGKWKVPFDPDYTFESEFYVDEKRSVKVS 240

  Fly   296 MM---------FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLS---RP 348
            ||         |.|:        ||..:.|||.|..: :|.|.:||::    |:| ||:.   :|
  Rat   241 MMKIEELTTPYFRDE--------ELSCSVLELKYTGN-SSALFILPDK----GRM-QQVEASLQP 291

  Fly   349 EFDLNRVAHRLRRQSV-AVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD-QPVRVSKI 411
            | .|.:....||.:.: .:.||:.....:..:.|.|..||:..:|:..:.::::.. :.:.||::
  Rat   292 E-TLKKWKDSLRPRKIDELYLPRLSISTDYSLEEVLPELGIRDVFSQQADLSRITGAKDLSVSQV 355

  Fly   412 LQKAYINVGEAGTEASAASYAKFVPLS-LPPKPTEFVANRPFVFAVRTP--ASVLFIGHVEYP 471
            :.|..::|.|.||||:||:.|..||.| .||....|  ||||:.||...  .::||:..|..|
  Rat   356 VHKVVLDVNETGTEAAAATGANLVPRSGRPPMIVWF--NRPFLIAVSHTHGQTILFMAKVINP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 107/386 (28%)
Serpina3mNP_001257911.1 serpinA3_A1AC 37..416 CDD:381019 107/386 (28%)

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