DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpine2

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_062070.1 Gene:Serpine2 / 29366 RGDID:3748 Length:397 Species:Rattus norvegicus


Alignment Length:392 Identity:122/392 - (31%)
Similarity:197/392 - (50%) Gaps:35/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VFSYMDRFSSE---------LFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGE 158
            |:|.::..|.|         :|.:|||||..:|||.||..:.::|.::...:||:|.::|.....
  Rat    18 VYSQLNSLSLEELGSDTGIQVFNQIIKSQPHENVVISPHGIASILGMLQLGADGRTKKQLSTVMR 82

  Fly   159 FSKNAMA-VAQDFESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQ 222
            ::.|.:. |.:.....|..||:   .|:.......:.|....|...:....|..|....::|:.|
  Rat    83 YNVNGVGKVLKKINKAIVSKKN---KDIVTVANAVFVRNGFKVEVPFAARNKEVFQCEVQSVNFQ 144

  Fly   223 NAKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQ-TQALLVNAVYFQGRWEHEFATMDTSPYDFQH 286
            :.......||.||.:.||..|.:|::|..:|.. |:.:|||||||:|.|:..|...:|....|..
  Rat   145 DPASACDAINFWVKNETRGMIDNLLSPNLIDSALTKLVLVNAVYFKGLWKSRFQPENTKKRTFVA 209

  Fly   287 TNGRISKVAMMFNDDVY--GLAELPE-LGATALELAYKDSATSMLILLPNE-TTGLGKMLQQLSR 347
            .:|:..:|.|:....|:  |..:.|. |....:||.|...:.||||.||.| :|.|..::..:|.
  Rat   210 GDGKSYQVPMLAQLSVFRSGSTKTPNGLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHIST 274

  Fly   348 PEFD--LNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPN----SQVTKLMDQPV 406
            ...:  :|.:..: |.|.|   ||||....:.|:.||||.||:.:||.|:    :::|:  .:.:
  Rat   275 KTINSWMNTMVPK-RMQLV---LPKFTAVAQTDLKEPLKALGITEMFEPSKANFAKITR--SESL 333

  Fly   407 RVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVR--TPASVLFIGHVE 469
            .||.|||||.|.|.|.||:|:..:.|..:..|.||   .|:.:|||:|.:|  ...::||:|.|.
  Rat   334 HVSHILQKAKIEVSEDGTKAAVVTTAILIARSSPP---WFIVDRPFLFCIRHNPTGAILFLGQVN 395

  Fly   470 YP 471
            .|
  Rat   396 KP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 120/388 (31%)
Serpine2NP_062070.1 serpinE2_GDN 21..395 CDD:381039 118/385 (31%)

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