DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpinf2

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001011892.1 Gene:Serpinf2 / 287527 RGDID:1306692 Length:491 Species:Rattus norvegicus


Alignment Length:472 Identity:118/472 - (25%)
Similarity:191/472 - (40%) Gaps:93/472 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QRQQQQQQQQQLQLQQQLLLQQQQHQRNPRPELG----LRSLPGNPWTQNNQEAISDVVAVDLTK 89
            |:...:|.||:|.....|.|..|        :||    |:..||:                  .|
  Rat    33 QQPVSEQAQQKLPPLALLKLGNQ--------DLGDHATLKRSPGD------------------CK 71

  Fly    90 REPVTPPPNRPPPVFSYMDRFSSELFKEIIKSQSQQNVVFSPFSVH-ALLALIYGASDGKTFREL 153
            ..|.|....|   :...|..|:::||..:.::.:..|:|.||.||. ||..|..||.: :|...|
  Rat    72 SAPTTEETRR---LSQAMMAFTTDLFSLVAQTSTSSNLVLSPLSVALALSHLALGARN-QTLENL 132

  Fly   154 QKAGEFSKNAMAVAQDFESVI-----KYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFS 213
            |:         .:..:..|.|     .:.::|....:.||.::|..:.. .:...:.|.::..|.
  Rat   133 QR---------VLHMNMGSCIPHLLSHFCQNLNPGTIRLAARIYLQKGF-PIKDDFLEQSEKLFG 187

  Fly   214 A------GTEAVDMQNAKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEH 272
            |      |.:..|:.|       ||.||.:.|..||.|.:  :::...|..||:||::|.|.|..
  Rat   188 AKPVKLTGRQEEDLMN-------INKWVKEATEGKIEDFL--SELPDNTVLLLLNAIHFHGFWRT 243

  Fly   273 EFATMDTSPYDFQHTNGRISKVAMMFNDDV---YGLAELPELGATALELAYKDSATSMLILLP-- 332
            :|....|....|.........||||.....   :.|.|.||:.......   .:..|.::::|  
  Rat   244 KFDPSLTQKDSFHLDEQFTVPVAMMHAQSYPLRWFLLEQPEIQVAHFPF---QNNMSFVVIMPTY 305

  Fly   333 ---NETTGLGKML-QQLSRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFT 393
               |.:..|..:. ..|.:|.         :|.:...|||||...|...|:...|..||:..:| 
  Rat   306 FGWNVSEVLANLTWDTLYQPS---------MREKPTKVRLPKLHLEQHLDLVATLSKLGLQDLF- 360

  Fly   394 PNSQVTKLMDQPVRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAV-- 456
            .:..:..:.||.:.||.:..::.:.:.|||.||:||:......:||    :.|..||||:|.:  
  Rat   361 QSPDLRGISDQSLVVSSVQHQSTMELSEAGVEAAAATSTAMTRMSL----SSFFLNRPFIFFIME 421

  Fly   457 RTPASVLFIGHVEYPTP 473
            .|....||:|.|..|.|
  Rat   422 ETIGIPLFVGSVRNPDP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 97/382 (25%)
Serpinf2NP_001011892.1 alpha2AP 82..433 CDD:239008 98/387 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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