DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpine1

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_036752.2 Gene:Serpine1 / 24617 RGDID:3249 Length:402 Species:Rattus norvegicus


Alignment Length:377 Identity:112/377 - (29%)
Similarity:183/377 - (48%) Gaps:27/377 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVI 174
            |..::|:.::::...:||||||:.|.::||::...:.|||.:::|.|..|:.:....|   .::.
  Rat    38 FGVKVFQHVVQASKDRNVVFSPYGVSSVLAMLQLTTAGKTRQQIQDAMGFNISERGTA---PALR 99

  Fly   175 KYKKHLEGA----DLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWV 235
            |..|.|.|:    :::.|..::..|:|..|......:.|. |....:.||....:.....||.||
  Rat   100 KLSKELMGSWNKNEISTADAIFVQRDLELVQGFMPHFFKL-FRTTVKQVDFSEMERARFIINDWV 163

  Fly   236 MDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFND 300
            ...|:..|.||:....|:..|:.:||||:||.|:|:..|....|....|..::|....|.||..:
  Rat   164 ERHTKGMISDLLAKGAVNELTRLVLVNALYFNGQWKTPFLEASTHQRLFHKSDGSTISVPMMAQN 228

  Fly   301 DVYGLAELPELGA---TALELAYKDSATSMLILLPNE----TTGLGKMLQQLSRPEFDLNRVAHR 358
            :.:...|......   ..|||.|.....||.|..|.|    .:.:..:|......::..|..  |
  Rat   229 NKFNYTEFTTPDGHEYDILELPYHGETLSMFIAAPFEKDVPLSAITNILDAELIRQWKSNMT--R 291

  Fly   359 LRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMF-TPNSQVTKLMDQ-PVRVSKILQKAYINVGE 421
            |.|..:   ||||..|.|.|:..||:.||:..:| :..:..|.|.|| .:.|::.|||..|.|.|
  Rat   292 LPRLLI---LPKFSLETEVDLRGPLEKLGMTDIFSSTQADFTSLSDQEQLSVAQALQKVKIEVNE 353

  Fly   422 AGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVR-TPA-SVLFIGHVEYP 471
            :||.||:::   .:.:|....|||.|.:|.|:|.|| .|. ::||:|.:..|
  Rat   354 SGTVASSST---AILVSARMAPTEMVLDRSFLFVVRHNPTETILFMGQLMEP 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 111/372 (30%)
Serpine1NP_036752.2 serpin 29..402 CDD:422956 111/375 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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