DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpina3j

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001094942.1 Gene:Serpina3j / 238395 MGIID:2182843 Length:420 Species:Mus musculus


Alignment Length:401 Identity:97/401 - (24%)
Similarity:167/401 - (41%) Gaps:76/401 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVA---QDFE 171
            |:..|:|::......:|.||||.|:...||.:...:.|.|..|:.:..:|:......|   |.|.
Mouse    54 FAFSLYKKLALKNPHKNFVFSPLSITIALASLSLGAKGNTLEEILEGLKFNLTETPEADIHQGFG 118

  Fly   172 SVIK------------------YKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEA 218
            .:::                  .:|||:                  :...:.|.|:..:......
Mouse   119 HLLQRLSQPGDQVQISTGNSMVVEKHLQ------------------ILAEFKEKARALYHTEVFT 165

  Fly   219 VDMQNAKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYD 283
            .|.|..::....:|.:|.:.|:..|::||  :|::.:|..::.|...|.|:|...|...:|....
Mouse   166 ADFQQPREARKLLNDYVSNQTQGMIKELV--SDLEERTSMVMTNFALFNGKWNMTFDPYETFMGT 228

  Fly   284 FQHTNGRISKVAMM---------FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLG 339
            |........||:||         |.|:        ::..|.:||.||.:..:|.| ||::    |
Mouse   229 FIEDRRTPVKVSMMKMKELRAPYFRDE--------KMKCTVVELNYKGNGKAMFI-LPDQ----G 280

  Fly   340 KMLQQLSRPEFDLNRVAHRLRRQSVAVR------LPKFQFEFEQDMTEPLKNLGVHQMFTPNSQV 398
            ||.|    .|..|.....|..|:|:..|      ||||.......:...|..||:.::|:..:.:
Mouse   281 KMKQ----VEASLQPATLRGWRKSLRPRMIDELYLPKFSISKNYRLENILPELGIKEVFSTQADL 341

  Fly   399 TKLM-DQPVRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAV--RTPA 460
            :.:. .:.||||::...|.:::.|.||||.|.:..|:..||....||....|.||:|.|  ....
Mouse   342 SGISGGKDVRVSRMFHSAALDMTETGTEARATTRDKYDFLSTKSNPTVVNLNTPFLFCVLHSDSE 406

  Fly   461 SVLFIGHVEYP 471
            ::.|:|.:..|
Mouse   407 NIDFMGKINNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 96/396 (24%)
Serpina3jNP_001094942.1 serpinA3_A1AC 37..417 CDD:381019 96/399 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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