DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpina3k

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:400 Identity:113/400 - (28%)
Similarity:193/400 - (48%) Gaps:75/400 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVA---QDFE 171
            |:..|:|::......:|:||||.|:.|.|||:...:.|||..|:.:..:|:......|   |.|.
Mouse    55 FAFSLYKKLALKNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQGFG 119

  Fly   172 SVIKYKKHLEGAD-LTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEA--VDMQNAKDTAAKINA 233
            ::::.....|..| :.:...::..::|..:...:::....|   .|||  .|.|...:....||.
Mouse   120 NLLQSLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALY---QTEAFTADFQQPTEAKNLIND 181

  Fly   234 WVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMM- 297
            :|.:.|:..|:.|:  :::|..|..:|||.:||:|:|:..|...||...:|.....|..||.|| 
Mouse   182 YVSNQTQGMIKKLI--SELDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMK 244

  Fly   298 --------FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLS---RPEFD 351
                    |.|:        ||..:.|||.|..:|:::|| ||::    |:| ||:.   :||  
Mouse   245 MKLLTARHFRDE--------ELSCSVLELKYTGNASALLI-LPDQ----GRM-QQVEASLQPE-- 293

  Fly   352 LNRVAHRLRR--------QSVAVRLPKF----QFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD- 403
                  .||:        |...:.||||    .:..|:|:   |..:|:.::||..:.::.:.: 
Mouse   294 ------TLRKWRKTLFSSQIEELNLPKFSIASDYRLEEDV---LPEMGIKEVFTEQADLSGITEA 349

  Fly   404 QPVRVSKILQKAYINVGEAGTEASAAS-----YAKFVPLSLPPKPTEFVANRPFVFAV-RTPA-S 461
            :.:.||:::.||.::|.|.||||:||:     ..|.|   ||    ....||||:..: .|.| |
Mouse   350 KKLSVSQVVHKAVLDVAETGTEAAAATGVIGGIRKAV---LP----AVCFNRPFLIVIYHTSAQS 407

  Fly   462 VLFIGHVEYP 471
            :||:..|..|
Mouse   408 ILFMAKVNNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 111/395 (28%)
Serpina3kNP_035588.2 SERPIN 57..417 CDD:214513 111/396 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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