DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpina12

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_620180.2 Gene:Serpina12 / 191570 RGDID:708485 Length:414 Species:Rattus norvegicus


Alignment Length:368 Identity:88/368 - (23%)
Similarity:181/368 - (49%) Gaps:15/368 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSK-NAMAVAQDFESV 173
            |..:|.:.:..:..|.|:..||.|:....:::...:...|..|:::...|.: :...:...|..:
  Rat    55 FGFKLLQRLASNSRQGNIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSDRDMHMGFHYL 119

  Fly   174 I-KYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMD 237
            : |..:..:...:::...::.::.| .....:.:.||..:.|.....:.|:.::|...||.::..
  Rat   120 LQKLNRETQDVKMSIGNALFMDQRL-RPQQRFLKLAKNLYDADMILTNFQDLENTQKNINKYISR 183

  Fly   238 TTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFNDDV 302
            .|.|:|.::|  .::||.|..||.|.:||||||::||....|...||....|:..||.|||...:
  Rat   184 KTHNRIENMV--KNIDPGTVMLLTNYIYFQGRWQYEFDPKQTKEEDFFIEEGKTVKVPMMFQRGM 246

  Fly   303 YGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQSVAVR 367
            |.:|...:|..|.||:.|:.:.|:..: ||:  :|..::|:|..:.:. ..:....|.::.|.|.
  Rat   247 YDMAYDSQLSCTILEMPYRRNITATFV-LPD--SGKLRLLEQGLQADI-FAKWKSLLSKRVVDVW 307

  Fly   368 LPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD-QPVRVSKILQKAYINVGEAGTEASAASY 431
            :|:.......:|.:.|..||:.::|..:..:|::.. :.::|.:.:.||.:.:.|.|||.:|.|.
  Rat   308 VPRLHISATYNMKKVLSRLGISKIFEEHGDLTRISSHRSLKVGEAVHKAELRMNEKGTEGAAGSG 372

  Fly   432 AKFVPLSLPPKPTEFVANRPFVFAV--RTPASVLFIGHVEYPT 472
            |:.:|:..|.:   ...|.||:..:  ....|::|:..:..|:
  Rat   373 AQTLPMETPRR---MKLNAPFLMMIYENLMPSMIFLARIYNPS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 87/362 (24%)
Serpina12NP_620180.2 alpha-1-antitrypsin_like 51..408 CDD:239011 87/362 (24%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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