DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Serpinf2

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_032904.1 Gene:Serpinf2 / 18816 MGIID:107173 Length:491 Species:Mus musculus


Alignment Length:491 Identity:110/491 - (22%)
Similarity:206/491 - (41%) Gaps:78/491 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLTVHLLAAQTFAQELIA-----WQRQQQQQQQQQLQLQQQLLLQQQQHQRNPRPELG----L 63
            ||:|::..|....|....::     .|:...:|.||:|.|.....|..|        :.|    |
Mouse     7 LLVLSLSCLQGPCFTFSPVSAVDLPGQQPVSEQAQQKLPLPALFKLDNQ--------DFGDHATL 63

  Fly    64 RSLPGNPWTQNNQEAISDVVAVDLTKREPVTPPPNRPPPVFSYMDRFSSELFKEIIKSQSQQNVV 128
            :..||:         ...|...:.|:|            :...|..|:::||..:.::.:..|:|
Mouse    64 KRSPGH---------CKSVPTAEETRR------------LAQAMMAFTTDLFSLVAQTSTSSNLV 107

  Fly   129 FSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVIKYKKHLEGADLTLATKVYY 193
            .||.||...|:.:...:..:|...|.:....:..:...    ..:..:.::|....:.||.::|.
Mouse   108 LSPLSVALALSHLALGAQNQTLHSLHRVLHMNTGSCLP----HLLSHFYQNLGPGTIRLAARIYL 168

  Fly   194 NRELGGVNHSYDEYAKFYFSA------GTEAVDMQNAKDTAAKINAWVMDTTRNKIRDLVTPTDV 252
            .:.. .:...:.|.::..|.|      |.:..|:.|       ||.||.:.|..||.|.:  :::
Mouse   169 QKGF-PIKDDFLEQSERLFGAKPVKLTGKQEEDLAN-------INQWVKEATEGKIEDFL--SEL 223

  Fly   253 DPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFNDDVYG----LAELPELGA 313
            ...|..||:||::|.|.|..:|....|.. ||.|.:.|.:....|.:...|.    |.|.||:  
Mouse   224 PDSTVLLLLNAIHFHGFWRTKFDPSLTQK-DFFHLDERFTVSVDMMHAVSYPLRWFLLEQPEI-- 285

  Fly   314 TALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAH-RLRRQSVAVRLPKFQFEFEQ 377
            ......:|::.:.::::.......:.::|..|:     .:.:.| .|:.:...|.|||...:.:.
Mouse   286 QVAHFPFKNNMSFVVVMPTYFEWNVSEVLANLT-----WDTLYHPSLQERPTKVWLPKLHLQQQL 345

  Fly   378 DMTEPLKNLGVHQMFTPNSQVTKLMDQPVRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPK 442
            |:...|..||:.::| ....:..:.:|.:.||.:..::.:.:.|||.||:||:......:||   
Mouse   346 DLVATLSQLGLQELF-QGPDLRGISEQNLVVSSVQHQSTMELSEAGVEAAAATSVAMNRMSL--- 406

  Fly   443 PTEFVANRPFVFAVR--TPASVLFIGHVEYPTPMSV 476
             :.|..||||:|.:.  |....||:|.|..|.|.::
Mouse   407 -SSFTVNRPFLFFIMEDTIGVPLFVGSVRNPNPSAL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 86/372 (23%)
Serpinf2NP_032904.1 alpha2AP 82..433 CDD:239008 87/377 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..491 0/3 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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