DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Serpini2

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:378 Identity:116/378 - (30%)
Similarity:192/378 - (50%) Gaps:20/378 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 MDR----FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNA---- 163
            ||:    |:.:|:|.|..| ::.||:|||.....||.::...:.||..:::.:.....|.:    
  Rat    22 MDQKNAEFAVDLYKAISLS-NKNNVIFSPLGTTVLLGMVQLGAKGKAQQQIMQTLRMQKTSTGEE 85

  Fly   164 MAVAQDFESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTA 228
            .:|.:...|.|..||  :.....||:.:|. :|...|..||....|.:|.:.|:.||..:||.:|
  Rat    86 FSVLKSLFSAISKKK--QEFTFNLASALYL-QEGFIVKESYLHSNKEFFQSATKLVDFLDAKTSA 147

  Fly   229 AKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISK 293
            ..|:.||...|..||:::.:..|..|.|:.:||||:||:|.|:.:|...||...||...:|...|
  Rat   148 QAISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFSKKDGSTVK 212

  Fly   294 VAMM--FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVA 356
            :.||  .....||......:....|||.||....|::||||.|...:.::.:|::...  :.:..
  Rat   213 IPMMKALLRAKYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNIEEVEKQVTARH--VQKWF 275

  Fly   357 HRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD-QPVRVSKILQKAYINVG 420
            ..|..:.|.|.||:|:.|.:.|..|.|.:|.|.::|:....::.:.| ..:.||:.:||.:..:.
  Rat   276 SELHEEEVEVSLPRFKIEQKLDFKEALFSLNVTEIFSGGCDLSGITDSSELYVSRAMQKVFFEIN 340

  Fly   421 EAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVR--TPASVLFIGHVEYP 471
            |.|:|| |||....:|..:....|:|:||.||:|.::  ...|:||:|.|..|
  Rat   341 EDGSEA-AASTGINIPAIMSLTQTQFLANHPFLFIMKHIQTESILFMGKVTDP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 113/372 (30%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 115/377 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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