DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Serpinc1

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_543120.1 Gene:Serpinc1 / 11905 MGIID:88095 Length:465 Species:Mus musculus


Alignment Length:377 Identity:98/377 - (25%)
Similarity:187/377 - (49%) Gaps:18/377 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 RFSSELFKEIIKSQS-QQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFES 172
            ||::..::.:..|:: ..|:..||.|:....|:....:...|.::|.:..:|...:...:.....
Mouse    90 RFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLKQLMEVFKFDTISEKTSDQIHF 154

  Fly   173 VIK------YKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDM-QNAKDTAAK 230
            ...      |:|..:.:||..|.:::.::.| ..|.||.:.::..:.|..:.:|. :|.:.:...
Mouse   155 FFAKLNCRLYRKANKSSDLVSANRLFGDKSL-TFNESYQDVSEVVYGAKLQPLDFKENPEQSRVT 218

  Fly   231 INAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVA 295
            ||.||.:.|..:|:|::....::..|..:|||.:||:|.|:.:|:..:|....|...:|:...|.
Mouse   219 INNWVANKTEGRIKDVIPQGAINELTALVLVNTIYFKGLWKSKFSPENTRKEPFYKVDGQSCPVP 283

  Fly   296 MMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLR 360
            ||:.:..:....:.| |...|||.:|....:|:::||.....|.|:.|:|: ||. |......|.
Mouse   284 MMYQEGKFKYRRVAE-GTQVLELPFKGDDITMVLILPKPEKSLAKVEQELT-PEL-LQEWLDELS 345

  Fly   361 RQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTP-NSQVTKLM---DQPVRVSKILQKAYINVGE 421
            ...:.|.:|:|:.|....:.|.|:::|:..:|:| .||:..::   ...:.||....||::.|.|
Mouse   346 ETMLVVHMPRFRTEDGFSLKEQLQDMGLIDLFSPEKSQLPGIVAGGRDDLYVSDAFHKAFLEVNE 410

  Fly   422 AGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVRTPA--SVLFIGHVEYP 471
            .|:||:|::.......||.|....|.|||||:..:|..|  :::|:|.|..|
Mouse   411 EGSEAAASTSVVITGRSLNPNRVTFKANRPFLVLIREVALNTIIFMGRVANP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 96/372 (26%)
Serpinc1NP_543120.1 serpinC1_AT3 71..464 CDD:381002 98/377 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.890

Return to query results.
Submit another query.