DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and serpine1

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001108031.1 Gene:serpine1 / 100136840 ZFINID:ZDB-GENE-070912-60 Length:384 Species:Danio rerio


Alignment Length:384 Identity:86/384 - (22%)
Similarity:165/384 - (42%) Gaps:54/384 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFR--------ELQKAGEFSKNAMAV 166
            |..::|.|.::|...:|:..||:.:.::|.:....:.|.|.:        .||:.| ..|....:
Zfish    28 FGLQVFAEAVQSAPDRNLALSPYGIASVLGMAQMGAYGATLKLLASKMGYSLQERG-MPKLQRLL 91

  Fly   167 AQDFESVIKYKKHLEGA-----DLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKD 226
            .:|..|    :..:|.|     |..:..:..:.|.|...           |.:....:|....:.
Zfish    92 QRDLAS----EDGVEVASGVMVDRKIILEKVFRRSLSKA-----------FQSVPHQIDFSQPEM 141

  Fly   227 TAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRI 291
            ....||:|..|.|...|.:.:....:...|:.:.:||::|.|.|:..|...:|....|...||..
Zfish   142 ARQVINSWTSDHTDGMISEFLPSGVLSELTRLVFLNALHFHGVWKTPFDPRNTREQLFHTVNGSA 206

  Fly   292 SKVAMMFNDDVYGLAELPE---LGATALELAYKDSATSMLILLPNE-TTGLGKMLQQLSRPEFDL 352
            ..|.||.....:...|...   :....:|:.|:..:.|||::.|.| ...|..:.::||...  :
Zfish   207 VSVPMMTTTQKFNYGEFVSKDGVDYDVIEMPYEGESISMLLVTPFEKDVPLSALNKELSSSR--I 269

  Fly   353 NRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPN----SQVTKLMDQPVRVSKILQ 413
            ::....:|:.|..:.:|:|..:.|.|:...|..:|:..:|:.:    |::|  .::|:.|||:||
Zfish   270 HQWRQEMRKISKQLSIPRFSMDTEIDLKSTLSRMGLGDIFSQSRADFSRIT--TEEPLCVSKVLQ 332

  Fly   414 KAYINVGEAGTEASAAS----YAKFVPLSLPPKPTEFVANRPFVFAV--RTPASVLFIG 466
            :..:.|.|.||:.|:|:    |::..       ..|...:|||.|.:  :...::||.|
Zfish   333 RVKLEVNEEGTKGSSATAAVIYSRMA-------VEEITLDRPFFFLIQHKPTGALLFSG 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 86/384 (22%)
serpine1NP_001108031.1 SERPIN 26..384 CDD:294093 85/382 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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