DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mr and Anapc2

DIOPT Version :10

Sequence 1:NP_611862.1 Gene:mr / 45906 FlyBaseID:FBgn0002791 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001094002.1 Gene:Anapc2 / 296558 RGDID:1305546 Length:836 Species:Rattus norvegicus


Alignment Length:806 Identity:303/806 - (37%)
Similarity:468/806 - (58%) Gaps:67/806 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PVEENV---FQNVRQHLMVLGSIDTFAAVVDLEIQSTIRNVLVPKFWKHIHDGLVSSKLQGWIND 89
            |.||.:   .:.:|.|.:.....:.|..|:..::|..|    ..:||..|       .|:....|
  Rat    64 PKEEELRAAVEVLRAHGLHSVLEEWFVEVLQNDLQGNI----ATEFWNAI-------SLRENSVD 117

  Fly    90 QALAIEALPDKNGLFTQFIDAINELHDSFQSLMQVKPRLIQLVGAETKPTAKTVKLMQEEGIKNC 154
            :...:..|.|..||....:|..  ||.  ..|::...||..|:||..:...:.|..|        
  Rat   118 EPQCLVLLLDAFGLLESRLDPY--LHS--LELLEKWTRLGLLMGAGAQGLREKVHTM-------- 170

  Fly   155 LRDCLLAQLPPNFSVVVGAFYWVHFKLFTKASNLALTTVDSDVFDEL----------------LC 203
            ||..|....|..|..:|...|....:::.::........|.::..||                ||
  Rat   171 LRGVLFFSTPRTFQEMVQRLYGRFLRVYMQSKRKGEGGTDPELEGELDSRYARRRYYRLLQSPLC 235

  Fly   204 VGCNFEAEQCCCQRLTDMVNKTNMKLFEMNLIDRLTGSALTALIKLKIKEHISDTCMGIFDRSHL 268
            .||..:.:||.|::..:..|:.:..|..::|::|::..|:|..:....:|.:.|.|.|.::||.|
  Rat   236 AGCGSDKQQCWCRQALEQFNQLSQVLHRLSLLERVSAEAVTTTLHQVTRERMEDRCRGEYERSFL 300

  Fly   269 KQLETWLSDVIMSWLTNIFTEWKSKDSISDIEVPE---SVKSFKVKLTYFMYETFAQSVIGQFFS 330
            ::...|:..|: .||..:|.:    |:.|....||   :::.::..:..|.|..:|...|.:.||
  Rat   301 REFHKWIERVV-GWLGKVFLQ----DNPSRPTSPEAGNTLRRWRCHVQRFFYRIYASLRIEELFS 360

  Fly   331 IIIDYPDSIPAIDDLKICMEKIDMRVYLTESLRNSLEARILHPGVNTMDILTGYVAAIKAIRHLD 395
            ||.|:|||.|||:|||.|:|:.|.|..|..||:.:||.|:|||||||.||:|.|::||||:|.||
  Rat   361 IIRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKVALETRLLHPGVNTCDIITLYISAIKALRVLD 425

  Fly   396 STGVILEMVTAPIKDYLRKRNDTVRRVVTGLT--EEGPTDLSEELAKGETIKECKDSG---TDEF 455
            .:.||||:...||:.|||.|.||||::|.|||  .:|..||:.||:|  |...|.::|   .|:.
  Rat   426 PSMVILEVACEPIRRYLRTREDTVRQIVAGLTGDSDGTGDLAVELSK--TDPACLETGQDSEDDS 488

  Fly   456 SNWENWQPDPFGIDASIMQYNSSRKMRSADIISMVVDIYGSKELFMTEYRNLMADRLLAQLDFNS 520
            ...|:|.|||...|.:    .||.|.||:||||::|.|||||:||:.|||:|:|||||.|..|:.
  Rat   489 GEPEDWVPDPVDADPA----KSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSP 549

  Fly   521 EKEIRNLELLKIRFGESLLHSCEVMLKDVTDSKRINAHIHSDGDR---TENQLFDISSLIVSAQF 582
            |:||||:||||:||||:.:|.|||||||:.||:||||:|..:.::   .|...|.:.::|:|::|
  Rat   550 EREIRNVELLKLRFGEAPMHFCEVMLKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEF 614

  Fly   583 WPSFNKESLQLPEEIENEFKKYTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAV 647
            ||.|..|.|::||:|......|.|.||..|..|||:|:...|.|.:::|:.|||:.:.|:|:.||
  Rat   615 WPPFKDEKLEVPEDIRAALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAV 679

  Fly   648 IIYHFQTKNEWTIEDLSSITKVPASALRRRLSFWQNHGLISETTPGIFTLLEKESEKSQYEDMSL 712
            ::.:||.:..||:|:||.:.|:|.:.||||:|.|...|::.|..||.|:::|:|..:.: ::|.|
  Rat   680 VLLYFQDQASWTLEELSKVVKMPVALLRRRMSVWLQQGVLREEPPGTFSVIEEERPQDR-DNMVL 743

  Fly   713 AEADEEDLESAMASASDQREEELQVFWSYIVGMLTNLDSMPIDRIHQMLKLFASHSGGV-EFTQD 776
            .::|:|. :|.|||.:||:||||.:||:||..|||||:|:.::||:.||::|......: |....
  Rat   744 IDSDDES-DSGMASQADQKEEELLLFWTYIQAMLTNLESLSLERIYSMLRMFVMTGPALAEIDLQ 807

  Fly   777 ELKHFLQRKVREHKLIFSGGVYQLAK 802
            ||:.:||:|||:.:||:|.|||:|.|
  Rat   808 ELQGYLQKKVRDQQLIYSAGVYRLPK 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrNP_611862.1 CULLIN 494..632 CDD:214545 69/140 (49%)
ANAPC2 741..800 CDD:462556 27/59 (46%)
Anapc2NP_001094002.1 Cullin <526..708 CDD:459983 84/181 (46%)
APC2 771..831 CDD:198081 27/59 (46%)

Return to query results.
Submit another query.