Protein Alignment lds and rapA

DIOPT Version :10

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_414601.1
• Gene: rapA / 948523
• ECOCYCID: EG11083
• Length: 968
• Species: Escherichia coli
• Alignment Length: 623
• Identity: 119/623 - (19%)
• Similarity: 217/623 - (34%)
• Gaps: 204/623 - (32%)

  Fly   434 GLKVSLMNHQ---KHALAWMSWRERKLPRGGILADDMGLGKTLT--MISSVLACKNGQEMSEGKD 493
            |.:.||:.||   .|.:.     .|..|| .:|||::|||||:.  ||..       |::..|..
E. coli   149 GQRTSLIPHQLNIAHDVG-----RRHAPR-VLLADEVGLGKTIEAGMILH-------QQLLSGAA 200

  Fly   494 ESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHH 558
            |.                               .|::.|.:|..||..|:   :.|..|...:..
E. coli   201 ER-------------------------------VLIIVPETLQHQWLVEM---LRRFNLRFALFD 231

  Fly   559 GNN-RETKGKYLRDYD---IVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVV--------RNH 611
            ... .|.:......:|   :|:.:.....|..:.|..:...:|..:::||||.:        |.:
E. coli   232 DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREY 296

  Fly   612 KSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKS-------- 668
            ::...||. .:.|..  .||.||.|......:|.|:.|..:.|   |.:.::::.:.
E. coli   297 QAIEQLAE-HVPGVL--LLTATPEQLGMESHFARLRLLDPNRF---HDFAQFVEEQKNYRPVADA 355

  Fly   669 -----AGGQ---NRLNLLMKSLMLRRTKAQLQ---SDGKLNSLPNKELRLIEISLDKEEMNVYQT 722
                 ||.:   :.||:|.:.:..:..:..||   ||.:......:|  |:.:.:|:...
E. coli   356 VAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQE--LVSMLMDRHGT----- 413

  Fly   723 VMTYSRTLFAQFLHQRAERETDFNYRSDAN---KPTYNQIKDPNGAYYKMHEKFARMAGSKK--E 782
                ||.||.             |.|:...   |...:.||.|....|:...|.:.:.|::|  |
E. coli   414 ----SRVLFR-------------NTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAE 461

  Fly   783 VKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEID-LLAQLNKLAITDTSTD 846
            .::.|:|           :|..|....:|:.:...      :..|.:: |:..|..
E. coli   462 DRARDML-----------YPERIYQEFEGDNATWW------NFDPRVEWLMGYLTS--------- 500

  Fly   847 GQQSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKA 911
                                                   || |.|:.::.....|::
E. coli   501 ---------------------------------------HR-SQKVLVICAKAATAL-------- 517

  Fly   912 IVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLN 976
                   .:..:||:   ::|:.....:..:.:..|......|.:.:...:|||.| ..|..|.|
E. coli   518 -------QLEQVLRE---REGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCS-EIGSEGRN 571

  Fly   977 LIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIY 1014
            ...|:|:::.||.:||.|..|...|:.|:||..::.|:
E. coli   572 FQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	HepA	287..1041	CDD:440319	119/623 (19%)
		DEXHc_TTF2	439..686	CDD:350830	57/279 (20%)
rapA	NP_414601.1	PRK04914	2..966	CDD:235319	119/623 (19%)