DRSC/TRiP Functional Genomics Resources

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Protein Alignment lds and MOT1

DIOPT Version :10

Sequence 1:NP_524850.2 Gene:lds / 45894 FlyBaseID:FBgn0002542 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_015243.1 Gene:MOT1 / 856023 SGDID:S000006003 Length:1867 Species:Saccharomyces cerevisiae


Alignment Length:1164 Identity:260/1164 - (22%)
Similarity:453/1164 - (38%) Gaps:297/1164 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SEYYSDKEEDSVVNNSSLGR-----------SRKSSRLSKSSRLS---------KSSRPSSAGVV 50
            ||.:|     .|:|...|.|           |.|:.|....|.|:         :...|:.|.||
Yeast   787 SEIFS-----PVMNKQLLNRDEFPVFRELVPSLKALRTQCQSLLATFVDVGMLPQYKLPNVAIVV 846

  Fly    51 IDETQSEEEESQSSETAE---SEKSDESDNSQNS-------QESEDSED------DSVRPSARNT 99
            ..||:: ...:...||||   .|..|:...|.|:       :..|||:.      :|.:.||:..
Yeast   847 QGETEA-GPHAFGVETAEKVYGEYYDKMFKSMNNSYKLLAKKPLEDSKHRVLMAINSAKESAKLR 910

  Fly   100 KRKPLGIPSDSEDEEDELEQRALSPSTRMSITGVRPQDLSDDDSEIEYSDEVQ--EGPTEAPTAE 162
            ....|...:.|....|.|..: |:|..|..:..|:.          |.::::|  .|.:.....:
Yeast   911 TGSILANYASSILLFDGLPLK-LNPIIRSLMDSVKE----------ERNEKLQTMAGESVVHLIQ 964

  Fly   163 AVVPRYTTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDATTNKENM 227
            .::.......:|.|..:|...:....|||.|.|..::.     ||..:.::..::..|..:..|:
Yeast   965 QLLENNKVNVSGKIVKNLCGFLCVDTSEVPDFSVNAEY-----KEKILTLIKESNSIAAQDDINL 1024

  Fly   228 SGPPFERPSKSLSPRSSAGASVVKTSKNLSQPTIQAVLKQKTSPAAPRRSRIKSEDQKVVSQVVY 292
            :     :.|:....:...|...:|....:..|:|...|.|..|......|..::|:...|.    
Yeast  1025 A-----KMSEEAQLKRKGGLITLKILFEVLGPSILQKLPQLRSILFDSLSDHENEEASKVD---- 1080

  Fly   293 DEEMRKLAEKRVQVSDAEKLFEKVAHKLPDKGSQIMKR----IDTLRRELAM----------DEQ 343
            :|:.:|:.:   .......||..::..|  :.|::..|    :..||..|::          |..
Yeast  1081 NEQGQKIVD---SFGVLRALFPFMSDSL--RSSEVFTRFPVLLTFLRSNLSVFRYSAARTFADLA 1140

  Fly   344 WISALRVQQSNVPAVRVVKPTLN-----PPRAPSID-------TLDWDELSEAVNEIKPVYTGAQ 396
            .||::.|.   ...:|.:.|.:|     ..|..|.:       :::.|.|...:..|.|:.    
Yeast  1141 KISSVEVM---AYTIREILPLMNSAGSLSDRQGSTELIYHLSLSMETDVLPYVIFLIVPLL---- 1198

  Fly   397 GMATFNNQKALTLES--------LKDLHVSLEDLPG-PEVLAED--------------------- 431
            |..:.:|:....|.:        |..|...:.|..| ||.|...                     
Yeast  1199 GRMSDSNEDVRNLATTTFASIIKLVPLEAGIADPKGLPEELVASRERERDFIQQMMDPSKAKPFK 1263

  Fly   432 -PVGLKVSLMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVLACKNGQEMSEGKDES 495
             |:.:|.:|..:|:..:.|:::. .|....|||.|||||||||..|..:               :
Yeast  1264 LPIAIKATLRKYQQDGVNWLAFL-NKYHLHGILCDDMGLGKTLQTICII---------------A 1312

  Fly   496 SDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHGN 560
            ||.....:..:|.:||         ::|...:|::||.||...||:|.:......|:.|......
Yeast  1313 SDQYLRKEDYEKTRSV---------ESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPT 1368

  Fly   561 NRETKGKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGK 625
            .|.|....|.|.||:||:|.:...:   |:.:...::...:|||.|:::|.:|:.:.||.::...
Yeast  1369 VRLTLRPQLSDADIIVTSYDVARND---LAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITAN 1430

  Fly   626 YRWALTGTPIQNKELDVYALLKFLR--------------CSPFDDLHTWKKWIDNKSAG--GQNR 674
            :|..||||||||..|::::|..||.              ..|.......|.....:.||  ....
Yeast  1431 HRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEA 1495

  Fly   675 LNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQR- 738
            |:..:...||||.|..:.||     ||.|.::           :.|..:....:.|:..|..:: 
Yeast  1496 LHKQVLPFMLRRLKEDVLSD-----LPPKIIQ-----------DYYCELGDLQKQLYMDFTKKQK 1544

  Fly   739 --AERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCH 801
              .|::.:.:..:|.                                |.| |...|..:|::|.|
Yeast  1545 NVVEKDIENSEIADG--------------------------------KQH-IFQALQYMRKLCNH 1576

  Fly   802 PGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGDDGPPL----- 861
            |.|:                   .:|....|||:... :..|..| ...:.||    |.|     
Yeast  1577 PALV-------------------LSPNHPQLAQVQDY-LKQTGLD-LHDIINA----PKLSALRT 1616

  Fly   862 ------LPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSV 920
                  :.:|....|||::   ::.|:.|:                    .|..:|::..|...:
Yeast  1617 LLFECGIGEEDIDKKASQD---QNFPIQNV--------------------ISQHRALIFCQLKDM 1658

  Fly   921 LDILRDHLSK---DGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANH 982
            ||::.:.|.|   ..|..:.|:|:|..::||.:|.:||: :.....|||:...||:||||.||:.
Yeast  1659 LDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNE-DPSIDCLLLTTKVGGLGLNLTGADT 1722

  Fly   983 LLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVL 1041
            ::.::..|||..:.||.||.:|:||||.|.:|:.:...|:|::|.|||..|:::|..|:
Yeast  1723 VIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVV 1781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ldsNP_524850.2 HepA 287..1041 CDD:440319 194/843 (23%)
DEXHc_TTF2 439..686 CDD:350830 71/262 (27%)
MOT1NP_015243.1 HEAT repeat 360..385 CDD:293787
HEAT repeat 406..438 CDD:293787
HEAT repeat 449..481 CDD:293787
HEAT repeat 490..519 CDD:293787
HEAT repeat 543..572 CDD:293787
DUF3535 611..1063 CDD:463447 62/302 (21%)
HepA <1258..1781 CDD:440319 160/648 (25%)
Blue background indicates that the domain is not in the aligned region.

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