DRSC/TRiP Functional Genomics Resources

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Protein Alignment lds and HIS4

DIOPT Version :9

Sequence 1:NP_524850.2 Gene:lds / 45894 FlyBaseID:FBgn0002542 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_009900.2 Gene:HIS4 / 850327 SGDID:S000000535 Length:799 Species:Saccharomyces cerevisiae


Alignment Length:453 Identity:86/453 - (18%)
Similarity:169/453 - (37%) Gaps:103/453 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RLSKSSRLSKSSRPSSAGVVIDETQSEEEESQSSETAESEKSDESDN---------SQNSQESED 86
            ||..:...|.:.|..:...::|....||.|..:....:.|.|.|:.:         ..|....:|
Yeast   255 RLQDAPEESYTRRLFNDSALLDAKIKEEAEELTEAKGKKELSWEAADLFYFALAKLVANDVSLKD 319

  Fly    87 SEDDSVRPSARNTKRKPLGIP---SDSEDEEDELE----------------QRALS-PSTRMS-- 129
            .|::......:.|:||....|   ...:.||::|.                |:||| |..:.|  
Yeast   320 VENNLNMKHLKVTRRKGDAKPKFVGQPKAEEEKLTGPIHLDVVKASDKVGVQKALSRPIQKTSEI 384

  Fly   130 -------ITGVRPQDLSDDDSEIEYSDEVQEGPTEAPTAEAVVPRYTTQFAGNIQNDLHSTIGAA 187
                   |..||.:   .:.:.:||:::........|...|..|.   ::...:..::...:   
Yeast   385 MHLVNPIIENVRDK---GNSALLEYTEKFDGVKLSNPVLNAPFPE---EYFEGLTEEMKEAL--- 440

  Fly   188 DSEVLDDSSGSDVLILSNKETPIEILSSTDDDATTNKENMSG---PPFERPSKSLSPRSSAGASV 249
                  |.|..:|......:.|.|         |...|...|   ..|.||.:.:......|.::
Yeast   441 ------DLSIENVRKFHAAQLPTE---------TLEVETQPGVLCSRFPRPIEKVGLYIPGGTAI 490

  Fly   250 V-KTSKNLSQPTIQAVLKQKTSPAAPRRSRIKSEDQKVVSQVVYDEEMRKLAEKRVQVSDAEKLF 313
            : .|:..|..|...|..|:....:.||:|     |.||..:|||..|  |:...::.::...:..
Yeast   491 LPSTALMLGVPAQVAQCKEIVFASPPRKS-----DGKVSPEVVYVAE--KVGASKIVLAGGAQAV 548

  Fly   314 EKVAHKLPDKGSQIMKRIDTLRRELAMDEQWISALRVQ-QSNVPAVRVVKPTLNPPRAPS----- 372
            ..:|:     |::.:.::|.:   |....|:::|.::. |::..|:    .:::.|..||     
Yeast   549 AAMAY-----GTETIPKVDKI---LGPGNQFVTAAKMYVQNDTQAL----CSIDMPAGPSEVLVI 601

  Fly   373 ------IDTLDWDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKD-LHVSLEDLPGPEVL 428
                  :|.:..|.||:|.:.|     .:|.:....|.....::.::| :|.....||..:::
Yeast   602 ADEDADVDFVASDLLSQAEHGI-----DSQVILVGVNLSEKKIQEIQDAVHNQALQLPRVDIV 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ldsNP_524850.2 SNF2_N 442..805 CDD:278600
DEXDc 459..634 CDD:238005
HELICc 885..1014 CDD:238034
HIS4NP_009900.2 PLN02346 140..341 CDD:215196 17/85 (20%)
Histidinol_dh 374..788 CDD:395657 63/334 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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