Protein Alignment lds and SWI2

DIOPT Version :10

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_171871.2
• Gene: SWI2 / 839417
• AraportID: AT1G03750
• Length: 862
• Species: Arabidopsis thaliana
• Alignment Length: 861
• Identity: 206/861 - (23%)
• Similarity: 357/861 - (41%)
• Gaps: 231/861 - (26%)

  Fly   257 SQPTIQAVLKQKTSPAAPRRSRIKSEDQKVVSQVVYDEEMRKLAEKRVQVSDAEKLFEKVAHKLP 321
            |.|:..::....|....|.|...||                .|:::.:::.|        ::.||
plant    16 SFPSSSSLRVSSTQELEPSRKPPKS----------------SLSQQLLRLDD--------SYFLP 56

  Fly   322 DK-GSQIMK--------RIDTLRRELAMDEQWISALRVQQSNVPAVRVVKPTLNPPRAPSIDTLD 377
            .| .|:|.|        ..|..:|.:..||:     .|.:.:..::...:|.|:  ||      :
plant    57 SKHESKISKTQVEDFDHNEDDHKRNIKFDEE-----EVDEDDERSIEFGRPGLS--RA------E 108

  Fly   378 WDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKD---LHVSLEDLPGPEVLAEDPVGLKVSL 439
            :|            |:|.        .:.|.|.|:.:   :||              |..:...|
plant   109 FD------------YSGP--------YEPLMLSSIGEIPIIHV--------------PASINCRL 139

  Fly   440 MNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVLACKNGQEMSEGKDESSDSDSEDDK 504
            :.||:..:.:| :...|...||||.||||||||:..| :.||...|::...|:....:||
plant   140 LEHQREGVKFM-YNLYKNNHGGILGDDMGLGKTIQTI-AFLAAVYGKDGDAGESCLLESD----- 197

  Fly   505 NKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRETKGKYL 569
                               :|..|::||:|::..||||.....|..|  |.|:||:||:...:.|
plant   198 -------------------KGPVLIICPSSIIHNWESEFSRWASFFK--VSVYHGSNRDMILEKL 241

  Fly   570 --RDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTG 632
              |..:::||::.....:...||   |:.|..:|.||||.::|.||:...|..:::.|.|..|||
plant   242 KARGVEVLVTSFDTFRIQGPVLS---GINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTG 303

  Fly   633 TPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQ----------------NRLNLLMKS 681
            |.:|||..:::.|.:::..........::.:.|.....||                ..|..|::.
plant   304 TVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRK 368

  Fly   682 LMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFN 746
            .||||||.  ::.|.|  :..||..::...:.:.:..|||.::            |..|.:...|
plant   369 YMLRRTKE--ETIGHL--MMGKEDNVVFCQMSQLQRRVYQRMI------------QLPEIQCLVN 417

  Fly   747 YRSDANKPTYNQIKD--------PNGAYYK-MHEKFARMAGSKKEVKSHD---------ILVLLL 793
              .|......:.:|.        |:|..:. :|.            .:||         :|..|:
plant   418 --KDNPCACGSPLKQSECCRRIVPDGTIWSYLHR------------DNHDGCDSCPFCLVLPCLM 468

  Fly   794 RLRQICCHPGLIDAMLDGEESQTMGDHSSDSDT--PEIDLLAQLNKLAITDTSTDGQQSVANAGD 856
            :|:||..|..||......|..:...|....|..  .:||||..::
plant   469 KLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGIS-------------------- 513

  Fly   857 DGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVL 921
                          |||:.:..|:.     :...|:..:.:::.:.|  |..||.::.|....:|
plant   514 --------------ASKSFMDLSDV-----KHCGKMRALEKLMASWI--SKGDKILLFSYSVRML 557

  Fly   922 DILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLL 986
            |||...|.:.|.:...|:|:.|...||.:|::|| .:..|:|.|:|..|||:||||:.||.:::.
plant   558 DILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFN-ASPSKQVFLISTKAGGLGLNLVSANRVVIF 621

  Fly   987 DLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVSSKL- 1050
            |.:|||..:.|||||.:|.|||::|::::.:...::|:.:...|..|..|::..:.| |:.::.
plant   622 DPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAG-KMETRYF 685

  Fly  1051 -TIDDLK----GLFGM 1061
             .:.|.|    .|||:
plant   686 EGVQDCKEFQGELFGI 701

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	HepA	287..1041	CDD:440319	192/803 (24%)
		DEXHc_TTF2	439..686	CDD:350830	75/264 (28%)
SWI2	NP_171871.2	HepA	<128..673	CDD:440319	169/661 (26%)
		DEXHc_ERCC6L2	139..373	CDD:350763	75/264 (28%)