Protein Alignment lds and AT3G20010

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_001319598.1
• Gene: AT3G20010 / 821539
• AraportID: AT3G20010
• Length: 1047
• Species: Arabidopsis thaliana
• Alignment Length: 1175
• Identity: 302/1175 - (25%)
• Similarity: 468/1175 - (39%)
• Gaps: 360/1175 - (30%)

  Fly   108 SDSEDEEDELEQRALSPS--TRMSITGV--RPQDLSDDDSEIEYSDEVQEGPTEAPTAEAVVPRY 168
            |...|.:||:..:.:.|.  |||..|.:  ||....|..:..|:::   :.|....:::...|..
plant     8 SSGSDSDDEVPPQPVWPQTRTRMDPTWLSRRPLPTVDSHARAEHTN---QAPPNGASSDTSRPGV 69

  Fly   169 TTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDATTNKENMSGPPFE 233
            :..|.|| .|.::|.|.:        .||:|.:.||:::..          ..|...:.:.||..
plant    70 SKPFTGN-GNTVNSRISS--------GSGADYVRLSSEQAL----------KRTLPPSFNSPPLP 115

  Fly   234 RPSKSLSPRSSAGASV-VKTSKNLSQPTIQAVLKQK-TSPAAPRRSRIKSEDQKVVSQVVYDEEM 296
            ..|.:.:..:::|:.| |...:.|||..::..|... ..|..|.||...:              :
plant   116 ARSGTNNISNASGSRVGVDYERPLSQQALKRTLPPSFNPPPLPSRSGTNN--------------I 166

  Fly   297 RKLAEKRVQVSDAEKLFEKVAHKLPDKGSQIMKRIDTLRRELAMDEQWISALRVQQSNVPAVRVV 361
            |.....|.....:......|.:|     |...........|:.:           |..|..||::
plant   167 RNAGGSRFGADYSHPAVSAVGNK-----STFGDHYSGAHAEIGI-----------QRGVNGVRIL 215

  Fly   362 KPTLNPPRAPSIDTLDWDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKDLH--VSLEDLPG 424
            .|:|.  ...|...|.....|:.::.    :.|.:.....|:::.:...:|:.|:  ::..|||
plant   216 PPSLT--HGTSASVLHHAGSSDPMHR----FGGGEDRNPDNDERLVYQAALQVLNQPMTESDLP- 273

  Fly   425 PEVLAEDPVGLKVSLMNHQKHALAWMSWRER---KLPRGGILADDMGLGKTLTMISSVL------ 480
                   |..|.|.||.|||.|||||..:|.   ..| |||||||.|||||::.|:.:|
plant   274 -------PGTLSVPLMRHQKIALAWMFQKETSSFNCP-GGILADDQGLGKTVSTIALILKQKIVS 330

  Fly   481 ------ACKNGQEM-----------------------------SE-------GKDESSDSDSEDD 503
                  :||...|.                             ||       |.||:..||.|..
plant   331 QLKSESSCKQETEALVLDADDESDNAKHESGSHVKPELKVSSNSETSVLSACGNDENDSSDMEKA 395

  Fly   504 KNKKRKSVT---GWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQ-KLTVCVHHGNNRET 564
            ::::..|.|   .||...      .|||:|||||::|||..|::.|||.: ||:|.|:||:||..
plant   396 EDEEANSSTRAFQWKRPA------AGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTK 454

  Fly   565 KGKYLRDYDIVVTTYQIVARE----------------------------HKSLSAVFG------- 594
            ....|.:||:|||||.||..|                            :|....|.|
plant   455 DPNELAEYDVVVTTYAIVTNEAPNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKR 519

  Fly   595 --------------------VKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKE 639
                                |.|.||:||||..::|:::|.:.:.|.||.|.||.|:||||||..
plant   520 RGRKSTNDTSSEPDCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTI 584

  Fly   640 LDVYALLKFLRCSPF----DDLHTWKKWIDNKSAGGQNRLNLLMKSLMLRRTKAQLQSDGK-LNS 699
            .|:|:..:|||..|:    ....|.|..|...|..|..:|..:::::||||||..| .||| :.:
plant   585 DDLYSYFRFLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTL-LDGKPIIN 648

  Fly   700 LPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNG 764
            ||.|.:.|.::.....|.:.|:.:...||:.|..:              :||...:.|..
plant   649 LPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAY--------------ADAGTLSQNYA----- 694

  Fly   765 AYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEI 829
                                  :||:|||||||.|.||.|:..            ::||.
plant   695 ----------------------NILLLLLRLRQACDHPQLVKR------------YNSDP----- 720

  Fly   830 DLLAQLNKLAITDTSTDGQQSVAN-------------------------------------AGDD 857
              :.::::.|:.....:.:..:.|                                     .||:
plant   721 --VGKVSEAAVRRLPREARSRLINRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDE 783

  Fly   858 GPPLLP----------------------DEARIAKASKNLLKRSNPVFNLHR-PSSKINMVIQIL 899
            ....:|                      |::..:.:..|.|.||  ||.... .||||..|:.||
plant   784 NTCPVPRCKQQLARDVVFSESSLRNCTSDDSGCSSSHDNGLDRS--VFQKRDFCSSKIKAVLDIL 846

  Fly   900 KT----------------SILKSSDD---------------------KAIVVSQWTSVLDILRDH 927
            ::                |..:..||                     |.|:.||||.:||::...
plant   847 QSLSQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVELR 911

  Fly   928 LSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNP 992
            :.:.|:....|:||:.:..|...|.||:.:.:.| |:|:||.||.:|||::.|.|::||||.|||
plant   912 ILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVK-VMLMSLKAGNLGLNMVAACHVILLDLWWNP 975

  Fly   993 QLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDL---ADGVLTGAKVSSKLTIDD 1054
            ..|.||.||.:|:||.:.|.:.:....||||.||..||::|..:   |.|...|...:::||:||
plant   976 TTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEKRTMVASAFGEEHGGSSATRLTVDD 1040

  Fly  1055 LKGLF 1059
            ||.||
plant  1041 LKYLF 1045

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	145/477 (30%)
		DEXDc	459..634	CDD:238005	84/281 (30%)
		HELICc	885..1014	CDD:238034	54/166 (33%)
AT3G20010	NP_001319598.1	SNF2_N	284..713	CDD:278600	145/477 (30%)
		DEXDc	<416..579	CDD:238005	54/162 (33%)
		RING	749..788	CDD:214546	2/38 (5%)
		Helicase_C	894..989	CDD:278689	41/95 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	94	1.000	Domainoid score	I2515
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	298	1.000	Inparanoid score	I793
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D132523at2759
OrthoFinder	1	1.000	-	-		FOG0000507
OrthoInspector	1	1.000	-	-		mtm1031
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1278
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.970