Protein Alignment lds and RAD54

DIOPT Version :10

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_188552.3
• Gene: RAD54 / 821455
• AraportID: AT3G19210
• Length: 910
• Species: Arabidopsis thaliana
• Alignment Length: 908
• Identity: 210/908 - (23%)
• Similarity: 351/908 - (38%)
• Gaps: 256/908 - (28%)

  Fly   206 KETPIEILSSTD-DDATTNKENMSGPPFERPSKSLSPRSSAGASVVKTSKNLSQPTIQAVLKQKT 269
            :|...|||||:| ||::.:.::.|             :.|.|.:        ..|..:.:.....
plant     2 EEEDEEILSSSDCDDSSDSYKDDS-------------QDSEGEN--------DNPECEDLAVVSL 45

  Fly   270 SPAAPRRSRIKSEDQKVVSQVVYDEEMRKLAEKRVQVSDAEKLFEKVAHKLP-----DKGSQIMK 329
            |..|.|:|: ..:|....:.||   :.:.|..:.:.|||...:..| ..|.|     |...|:.:
plant    46 SSDADRKSK-NVKDLLRGNLVV---QRQPLLPRVLSVSDGAAVCRK-PFKPPCSHGYDSTGQLSR 105

  Fly   330 RIDTLRRELAMDEQWISALRVQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAV---NEIKPV 391
            |:...:|.:    .|       .|:.|.| |..||    :..:...::.||..|.|   .:|:|:
plant   106 RLSARKRFV----PW-------GSSTPVV-VALPT----KLEASTNIERDEEEEVVCLPPDIEPL 154

  Fly   392 YTGAQGMATFNNQKALTLESLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRERK 456
            ..........:|...:.:.|:....:......|.:.:.:...||         |..|.::
plant   155 VLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGL---------HGSANIN----- 205

  Fly   457 LPRGGILADDMGLGKTLTMISSV--LACK--NGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSK 517
               |.||||||||||||..|:.:  |.|:  :|..|.                ||
plant   206 ---GCILADDMGLGKTLQSITLLYTLLCQGFDGTPMV----------------KK---------- 241

  Fly   518 GRKDTRRGGTLVVCPASLLRQWESEVESKVSR--QKLTVCVHHGNNRETKGKYLRDYD------- 573
                     .::|.|.||:..||:|::..|..  |.:.:|      ..|:...|...|
plant   242 ---------AIIVTPTSLVSNWEAEIKKWVGDRIQLIALC------ESTRDDVLSGIDSFTRPRS 291

  Fly   574 ---IVVTTYQIVAREHKSLSAVFGVKWRR------IILDEAHVVRNHKSQSSLAVCDLRGKYRWA 629
               :::.:|: ..|.|.|       |:.:      :|.||||.::|.::.::.|:..|..|.|..
plant   292 ALQVLIISYE-TFRMHSS-------KFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVL 348

  Fly   630 LTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWID----------------NKSAGGQNRLNLL 678
            |:|||:||...:.:|::.|.......|...::.:.:                |.:|.....|:..
plant   349 LSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSK 413

  Fly   679 MKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERET 743
            :...:||||.|.|.     |.||.|   :||:...|        :.|...||:..|:..:..:..
plant   414 VNQFILRRTNALLS-----NHLPPK---IIEVVCCK--------MTTLQSTLYNHFISSKNLKRA 462

  Fly   744 DFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAM 808
                                            :|.:.|:.|   :|..:..|:::|.||.||...
plant   463 --------------------------------LADNAKQTK---VLAYITALKKLCNHPKLIYDT 492

  Fly   809 LDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGDDGPPLLPDEARIAKASK 873
            :......|:|..               |.|..........:|.|..|.||       |.:..:.|
plant   493 IKSGNPGTVGFE---------------NCLEFFPAEMFSGRSGAWTGGDG-------AWVELSGK 535

  Fly   874 NLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSL 938
                       :|        |:..|..::.:.:||:.::||.:|..||:......:.....|.|
plant   536 -----------MH--------VLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRL 581

  Fly   939 NGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIY 1003
            :|:..:..||.:||..||....:...|||..|||.||||||||.|:|.|..|||..:.||..|::
plant   582 DGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVW 646

  Fly  1004 RVGQKKNVIIYKFMCVDTVEQRI-------KGLQDKKLDLADGVLTGAKVSSKLTIDDLKGLF 1059
            |.||||.|.:|:|:...|:|:::       :|||  |:...:......:..:.|:.:||:.||
plant   647 RDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQ--KVIQHEQTDNSTRQGNLLSTEDLRDLF 707

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	HepA	287..1041	CDD:440319	187/806 (23%)
		DEXHc_TTF2	439..686	CDD:350830	63/284 (22%)
RAD54	NP_188552.3	HepA	<180..679	CDD:440319	155/656 (24%)
		DEXHc_RAD54	180..421	CDD:350762	66/306 (22%)