Protein Alignment lds and CHR5

DIOPT Version :10

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_178970.3
• Gene: CHR5 / 815823
• AraportID: AT2G13370
• Length: 1724
• Species: Arabidopsis thaliana
• Alignment Length: 1152
• Identity: 260/1152 - (22%)
• Similarity: 440/1152 - (38%)
• Gaps: 336/1152 - (29%)

  Fly     5 NSEYY---SDKEEDSV--------VNNSSL--------GRSRKSSRLSKSSRLSKSSRPSSAGVV 50
            :.|||   .|.:.|.|        .|:.||        ..||.|..:.|:...|.|:...:....
plant   176 SDEYYEQDEDNQSDHVHYKGYSNPTNSRSLPKAGSAVHSNSRTSRAIHKNIHYSDSNHDHNGDAD 240

  Fly    51 IDETQSEEEESQSSETAESEKSDESDN-------------SQNSQESE------DSEDD------ 90
            :|  ..|||:....|.|:.|..|.:|:             |....||:      |.|||
plant   241 MD--YEEEEDEDDPEDADFEPYDAADDGGASKKHGQGWDVSDEDPESDEEIDLSDYEDDYGTKKP 303

  Fly    91 SVRPSARNTKRKPLGIPSDSEDEEDELEQRALSPSTRMSITGVRPQDLSDDDSEIEYSDEVQEGP 155
            .||..::..::...|           ||:::...|:|..    |.....|||||.:..::..||
plant   304 KVRQQSKGFRKSSAG-----------LERKSFHVSSRQK----RKTSYQDDDSEEDSENDNDEG- 352

  Fly   156 TEAPTAEAVVPRYTTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDA 220
                 ..::..|.||....|.::.  :|||.: |||  .||...|    .|.:.:|...|.|.|.
plant   353 -----FRSLARRGTTLRQNNGRST--NTIGQS-SEV--RSSTRSV----RKVSYVESEDSEDIDD 403

  Fly   221 TTNKENMSGPPFERPS----KSLSPRSSAGASVVKTSKNLSQPTIQAVLKQKTSPAAPRRSRIKS 281
            ..|::|......|..:    |.|..:.......|:|:...:.|.:
plant   404 GKNRKNQKDDIEEEDADVIEKVLWHQLKGMGEDVQTNNKSTVPVL-------------------- 448

  Fly   282 EDQKVVSQVVYDE----EMRKLAEKRVQ---------VSDAEKL--FEKVAHKLPDKGSQIMKRI 331
                 |||:...|    ||..|.:.:.|         :||.:.|  |:||.:.......:|..|.
plant   449 -----VSQLFDTEPDWNEMEFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRT 508

  Fly   332 DTLRRELAMDEQWISA---LRVQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEIKPVYT 393
            ...|.|:.:::  :|.   |.:.:.|....|::           .|.:..|.|.:.|.|....:.
plant   509 ALSREEIEVND--VSKEMDLDIIKQNSQVERII-----------ADRISKDGLGDVVPEYLVKWQ 560

  Fly   394 G-AQGMATFNNQ-----KALTLESLKDLHVSLEDLPGPEV-------------LAEDPVGL-KVS 438
            | :...||:...     ..:.::..|...||:. :.|..|             |.|.|..| ..:
plant   561 GLSYAEATWEKDVDIAFAQVAIDEYKAREVSIA-VQGKMVEQQRTKGKASLRKLDEQPEWLIGGT 624

  Fly   439 LMNHQKHALAWM--SWRERKLPRGGILADDMGLGKTLTMISSVLACKNGQEMSEGKDESSDSDSE 501
            |.::|...|.::  ||..   ....||||:||||||:..:|.:...:|.|::.
plant   625 LRDYQLEGLNFLVNSWLN---DTNVILADEMGLGKTVQSVSMLGFLQNTQQIP------------ 674

  Fly   502 DDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESE-------------VESKVSRQKLT 553
                                   |..|||.|.|.|..|..|             |.::.||:
plant   675 -----------------------GPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASRE--- 713

  Fly   554 VCVHHGNNRETK-GKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSL 617
            ||..:....|.| |:.:: ::.::|||::|.::...||.   :||..:::||||.::|.::|...
plant   714 VCQQYEFYNEKKVGRPIK-FNALLTTYEVVLKDKAVLSK---IKWIYLMVDEAHRLKNSEAQLYT 774

  Fly   618 AVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQN---RLNLLM 679
            |:.:...|.:..:||||:||...:::|||.||....|.:...:.:...|.|:..::   .|:|.:
plant   775 ALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLEL 839

  Fly   680 KSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETD 744
            :..:|||....::     .|||.|..|::.:.:...:...|:.::                 |.:
plant   840 RPHILRRVIKDVE-----KSLPPKIERILRVEMSPLQKQYYKWIL-----------------ERN 882

  Fly   745 FNYRSDANKPTY-NQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAM 808
            |:   |.||... ||:                           .:|.:::.|::.|.||.|.::
plant   883 FH---DLNKGVRGNQV---------------------------SLLNIVVELKKCCNHPFLFES- 916

  Fly   809 LDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGDDGPPLLPDEARIAKASK 873
                     .||....|              |.|.|                         |..|
plant   917 ---------ADHGYGGD--------------INDNS-------------------------KLDK 933

  Fly   874 NLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSL 938
            .:|.           |.|:.::.::|..  |:.:..:.::.||...:||||.::||..|.....|
plant   934 IILS-----------SGKLVILDKLLVR--LRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRL 985

  Fly   939 NGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIY 1003
            :|:...:.||..::.||...:.....|||..|||:|:||..|:.:::.|..||||.:.||..|.:
plant   986 DGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAH 1050

  Fly  1004 RVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVSSKL 1050
            |:||::.|.||:|:...:||:.|.....:|:.|...|:.......:|
plant  1051 RIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRL 1097

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	HepA	287..1041	CDD:440319	186/811 (23%)
		DEXHc_TTF2	439..686	CDD:350830	68/265 (26%)
CHR5	NP_178970.3	MSCRAMM_ClfA	<106..420	CDD:468110	67/275 (24%)
		CD1_tandem	418..498	CDD:349307	19/104 (18%)
		CD2_tandem	531..587	CDD:349306	10/66 (15%)
		PLN03142	612..>1152	CDD:215601	153/645 (24%)
		DUF4208	1534..1626	CDD:464035