Sequence 1: | NP_524850.2 | Gene: | lds / 45894 | FlyBaseID: | FBgn0002542 | Length: | 1061 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286676.1 | Gene: | dom / 45655 | FlyBaseID: | FBgn0020306 | Length: | 3233 | Species: | Drosophila melanogaster |
Alignment Length: | 1386 | Identity: | 273/1386 - (19%) |
---|---|---|---|
Similarity: | 480/1386 - (34%) | Gaps: | 526/1386 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 SKSSRLSKSSRPSSAGVVIDETQSEEE---ESQSSETAESEKSDESDNSQNSQESEDSEDDSVRP 94
Fly 95 SARNTKRKPLGIPSDSEDEEDEL---EQRALSPSTRMSITGVRPQDLSDDDSEIEYSDEVQEGPT 156
Fly 157 EAPTAEAVVPRYTTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDAT 221
Fly 222 TNKENMSGPPFERPSKSLSPRSSAGASVVKTSKNLSQPTIQAVLKQKTSPAAPRRSRIKSEDQKV 286
Fly 287 VSQVVYDEEMRKLAEKRVQV-SDAEKLFEKVAHKLPDKGSQIMKRIDTLRRELAMDEQWISALRV 350
Fly 351 QQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEIKPVYTGAQGMATFN-----NQKALTLE 410
Fly 411 SLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWM-SWRERKLPRGGILADDMGLGKTLT 474
Fly 475 MISSV--LACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLR 537
Fly 538 QWESEVESKVSRQKLTVCVHHGNNRETKGKYL-----RDYDIVVTTYQIVAREHKSLSAVFGVKW 597
Fly 598 RRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKK 662
Fly 663 WIDNKSAG---GQ--------NRLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEE 716
Fly 717 MNVYQTVMTYSRTL--------------------------------------------------- 730
Fly 731 -------FAQ---------FLHQRAERETDFNYRSDANKPTYNQIKD-----------PNGAY-Y 767
Fly 768 KMHEKFARMA----------GSKKEVKSHDILVLLLR--------LRQI---------CCHPGLI 805
Fly 806 DAMLDGEESQTMGDHSSDSDTPEIDLL---------AQLN------------------------- 836
Fly 837 -----------------------KLAITDTSTDGQ---------------------QSVAN---- 853
Fly 854 ------AGD------------------------------DGPPLLPDEARIA-----KASKNLLK 877
Fly 878 RS------------------------------------NPVFN---LHRPS-------------- 889
Fly 890 -------SKI-NMVIQILKTSI------------------------------------LKSSDDK 910
Fly 911 AIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRV--LLLSLTAGGV 973
Fly 974 GLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLAD 1038
Fly 1039 GVLTGAKVSS----KLTIDDL 1055 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lds | NP_524850.2 | SNF2_N | 442..805 | CDD:278600 | 100/487 (21%) |
DEXDc | 459..634 | CDD:238005 | 49/181 (27%) | ||
HELICc | 885..1014 | CDD:238034 | 50/188 (27%) | ||
dom | NP_001286676.1 | HSA | 543..614 | CDD:214727 | |
ASF1_hist_chap | <674..831 | CDD:304562 | 44/232 (19%) | ||
FAM176 | <824..>868 | CDD:291517 | 10/63 (16%) | ||
SNF2_N | 952..1238 | CDD:278600 | 82/334 (25%) | ||
DEXDc | 969..1108 | CDD:238005 | 49/180 (27%) | ||
Helicase_C | 1692..1806 | CDD:278689 | 40/116 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467173 | |
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I705 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |