| Sequence 1: | NP_524850.2 | Gene: | lds / 45894 | FlyBaseID: | FBgn0002542 | Length: | 1061 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
| Alignment Length: | 1323 | Identity: | 265/1323 - (20%) |
|---|---|---|---|
| Similarity: | 464/1323 - (35%) | Gaps: | 450/1323 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SSENSEYYSDKEEDSVVNNSSLGRSRKSSR-LSKSSRLSKSSRPS-----SAGVVID-ETQSEEE 59
Fly 60 ESQSSET---------------------------------------------------------A 67
Fly 68 ESEKSDESDNSQNSQESEDSEDDSVRPSARNTKRKPLGIPSDSEDEEDELEQR------------ 120
Fly 121 --ALSPSTRMSITGVRPQDLSDD----------DSEIEY---------SDEVQEGP------TEA 158
Fly 159 PTAE------AVVPRYTTQFAGN---IQNDLHSTI------------------------------ 184
Fly 185 -------------------------------GAADSEVLDD--------SSGSDVLILSN----- 205
Fly 206 ----KETPIEILSSTDDDATTNKENMSGPPFERPSKSL-----SPRSS-AGASVVKTSKNLSQPT 260
Fly 261 IQAVLKQKTSPAAPRRSRIKSEDQKVVSQVVYDEEMRKLAEKRVQVSDAEKLFEKVAHKLPDKGS 325
Fly 326 QIMKRIDTLRRELAM---DEQWISALRVQQSNV-PAVRVVKPTLNPPRAPSIDTL---------- 376
Fly 377 ---DWDELSEAVNEIKPV---YTGAQGMATFNNQKALTLESLKDLHVSL-----ED------LPG 424
Fly 425 PEVLAED--------PV---GLKVSLMNHQKHALAWM--SWRERKLPRGG---ILADDMGLGKTL 473
Fly 474 TMISSVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQ 538
Fly 539 WESEVE-------------SKVSR---QKLTVCVHHGNNRETKGKYLR----DYDIVVTTYQIVA 583
Fly 584 REHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKF 648
Fly 649 LRCSPFDDLHTWK-KWIDNKSAGGQNRLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISL 712
Fly 713 DKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMA 777
Fly 778 GSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITD 842
Fly 843 TSTDGQQSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSS 907
Fly 908 DDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGG 972
Fly 973 VGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLA 1037
Fly 1038 DGVL---TGAKVS--SKLTIDDL 1055 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lds | NP_524850.2 | SNF2_N | 442..805 | CDD:278600 | 84/388 (22%) |
| DEXDc | 459..634 | CDD:238005 | 46/197 (23%) | ||
| HELICc | 885..1014 | CDD:238034 | 43/128 (34%) | ||
| Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 7/51 (14%) |
| PHD1_CHD_II | 380..422 | CDD:277006 | 0/41 (0%) | ||
| PHD2_CHD_II | 440..482 | CDD:277007 | 5/45 (11%) | ||
| CHROMO | 490..558 | CDD:237991 | 14/73 (19%) | ||
| CHROMO | 615..667 | CDD:214605 | 7/51 (14%) | ||
| SNF2_N | 734..1028 | CDD:278600 | 84/388 (22%) | ||
| DEXDc | 751..907 | CDD:238005 | 45/193 (23%) | ||
| Helicase_C | 1053..1167 | CDD:278689 | 40/115 (35%) | ||
| DUF1087 | <1292..1337 | CDD:283996 | |||
| DUF1086 | 1380..1517 | CDD:283992 | |||
| CHDCT2 | 1756..1927 | CDD:285336 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45467203 | |
| Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I705 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.840 | |||||