Protein Alignment lds and CG7376

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_001261471.1
• Gene: CG7376 / 38715
• FlyBaseID: FBgn0035689
• Length: 1270
• Species: Drosophila melanogaster
• Alignment Length: 1195
• Identity: 219/1195 - (18%)
• Similarity: 358/1195 - (29%)
• Gaps: 545/1195 - (45%)

  Fly   375 TLDWDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKDLHVSLE---DLPGPEVLAEDPVGLK 436
            :|:::...:.....:|:.|    ..|.....||..:..:.:||..|   ||         |...:
  Fly   106 SLEFEVAQQEKEHKRPLKT----YVTTKLYDALYEKHRQTVHVEQERSLDL---------PKRFQ 157

  Fly   437 VSLMNHQKHALAWMSWRERK----------------------------------------LPRGG 461
            ..|..:|:..::||..||::                                        ||.||
  Fly   158 SQLRKYQQRTVSWMLGREQQITQVPANFIVLHAIDGITRVFKHKYCLQFYPFEEEIPKISLPPGG 222

  Fly   462 ILADDMGLGKTLTMISSVL-------ACKNG---QEMSEGKDE----SSDSDSEDD-------KN 505
            ||||:||||||:..::.:|       :.:|.   |.:.|..||    .|....:|:       |:
  Fly   223 ILADEMGLGKTVEFLAMLLMNPRPQDSYRNDYWHQRLEEFSDEVPLKRSRISKKDEVFCICTKKH 287

  Fly   506 KKRKSVT---GWK-------------------------SKGRKDTRRGGTLVVCPASLLRQWESE 542
            .||...|   .|:                         ..|.:....|.|::|.|.::..||..|
  Fly   288 GKRVQCTKCRRWQHEMCMTISEKSDLPHLCPSCWSELVKSGERLVESGATIIVSPNAIKMQWFEE 352

  Fly   543 VESKVSRQKLTVCVHHGNNRE--TKGKYLRDYDIVVTTYQIVARE--------------HKSL-- 589
            :...:| ..|.|.::.|.:..  .....|..||:|:|.|.|:..|              |:..
  Fly   353 IHKHIS-PSLKVLLYFGLHSTFWVSPFDLAQYDVVLTDYTILRNEIYHTTDFKSDRQMRHQQRYM 416

  Fly   590 ---SAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGT------------------ 633
               |.:..|.|.|:.||||.:|.:..|.::..|..|....|||:|||
  Fly   417 RPNSPLLMVNWWRVCLDEAQMVESSTSAAAEMVRMLPAINRWAVTGTIDELPPLLEFVGRPEVCR 481

  Fly   634 -----------------------------------------------------PIQNKELDVY-- 643
                                                                 .:.|.|...|
  Fly   482 PPDAWQTVDKAFQLNYKCEPLLELLEHSLWRTCKSKVEHELGIPPQTEVVHRLELSNVESLYYRE 546

  Fly   644 ------------------------------------ALLK-FLR----CS--------------- 652
                                                .:|| |||    ||
  Fly   547 EHLKCHEQFLAAVAKHTRHNADNSSCLASISPQLLRIILKPFLRIRQTCSVPVVFNSNVSSTDYL 611

  Fly   653 -PFD---------------DLHTWKK---------WIDN-------------KSAGGQNRLNLLM 679
             |.|               :|.||..         :|.|             |.|...|..|:.:
  Fly   612 HPQDLLARLKSNNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKYYNLLLKLANEYNEQNISV 676

  Fly   680 KSLM-------LRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQ 737
            .|::       |.:..:...::.||..|.:|:.:.....|:.:.:.....|:..:.:.:.:.|.:
  Fly   677 DSVLQIHAIYNLLQASSLAPAEHKLTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEK 741

  Fly   738 RAERETDF------------NYRSDANKPTYNQIKDP-----------------NGAYYKM---H 770
            .:|.|..|            |:::..:...:|:::|.                 .|..|.|   |
  Fly   742 VSELEKRFEGSTLDLLATMVNHKTSLHDAIWNKVRDDFFRQNISVERLENVNSMAGMLYFMDIWH 806

  Fly   771 EKFARM-------------------------------------------------AGSKKEV--K 784
            .|...:                                                 |...|.|  |
  Fly   807 NKLQNLKSTLIAEFEFLKGVMQQACEAIKTGVLLSMEIINFIENVTVCHLTDILDANKDKPVKPK 871

  Fly   785 SHDILVLLL---RLRQICCHPGLIDAMLDGEESQTMGDHS----------------SDSDTPE-- 828
            .|....|.|   .|.|..|.  |....||.:.:.|.|..:                |..|..|
  Fly   872 KHRYCRLCLIRDSLNQFECL--LFAKKLDEKATVTEGLENPSMEISFIKSIFAFLRSKQDFSEWK 934

  Fly   829 ------IDLLA--------------------------QLNKLAITDTSTDGQQS----------- 850
                  ::||:                          ::.|:.|..|....:||
  Fly   935 EECQSKLELLSCLQDLVKFQIKYWIEVEYMVKAFDELEMCKMRILLTDDPEEQSNYRILACQLDE 999

  Fly   851 -----------------------------VANAGDDGPPL--LPDEAR---------IAKASKNL 875
                                         ..::.|...|:  ..|:.|         :.:...:.
  Fly  1000 QLQFNQYNLQTSQLNFTRLCGRLKYLKHLKEDSADKPCPICQTQDDVRYVMMVCGHFVCQHCLDS 1064

  Fly   876 LKRSN--------PVFNLHRP------------------SSKINMVIQILKTSILKSSDDKAIVV 914
            ::|.|        |:.....|                  |:||:.|::::.....::..:|.||.
  Fly  1065 MRRKNGRAGVTKCPLCRQDSPQLYYSVRPGAHKSIIGDFSTKISSVVELVLKIKGENEQEKIIVF 1129

  Fly   915 SQWTSVL-DILRDHLSKDGVATLSLNGTIPVKNRQDIVN-EFNDRNN---QKRVLLLSLTAGGVG 974
            |||.::| :|.|         .|||||   ::.|....| :|:|..|   ....||:.|:.|..|
  Fly  1130 SQWQAILIEIAR---------ALSLNG---IQFRNKCTNKDFDDFKNPLSNVTCLLMPLSKGSKG 1182

  Fly   975 LNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADG 1039
            ||||.|.|:.|::...||..|.||..||:|.|||:...:::|:..:|:|:.|..|    :..||.
  Fly  1183 LNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENILSL----ITSADD 1243

  Fly  1040 VLTGAKVSS-----KLTIDDLKGLF 1059
            ..|   :|:     .:|:|.||.||
  Fly  1244 TTT---LSTHWDLENMTLDSLKKLF 1265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	122/732 (17%)
		DEXDc	459..634	CDD:238005	64/315 (20%)
		HELICc	885..1014	CDD:238034	47/151 (31%)
CG7376	NP_001261471.1	SNF2_N	221..601	CDD:278600	74/380 (19%)
		PHD_SF	281..320	CDD:304600	5/38 (13%)
		TPR	636..669	CDD:197478	4/32 (13%)
		RING	1037..1083	CDD:238093	6/45 (13%)
		HepA	<1096..1238	CDD:223627	51/157 (32%)
		Helicase_C	1108..1214	CDD:278689	40/117 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467227
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840