Protein Alignment lds and Btaf1

DIOPT Version :10

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_001426331.1
• Gene: Btaf1 / 368042
• RGDID: 1564130
• Length: 1848
• Species: Rattus norvegicus
• Alignment Length: 791
• Identity: 203/791 - (25%)
• Similarity: 319/791 - (40%)
• Gaps: 182/791 - (23%)

  Fly   327 IMKRIDTLRRELAMDEQ---WISALR---VQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAV 385
            :|.:|.|:.......|:   |:.|:.   .|:..:.|:..|...|:....|.|..|....|....
  Rat  1131 VMSKIATMETMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMS 1195

  Fly   386 NEIKPV-YTGAQGMATF--------------NNQKALTLESLKDLHVSLEDLPGPEVLAED---P 432
            ::...| :...|..||.              |..:.|.....|:.|...:.|.|.::  |:   |
  Rat  1196 DQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKL--ENYKIP 1258

  Fly   433 VGLKVSLMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVLA---CKNGQEMSEGK-D 493
            |.:...|..:|:..:.|:::. .|....|||.|||||||||..| .:||   |:..||.:..| .
  Rat  1259 VPINAELRKYQQDGVNWLAFL-NKYKLHGILCDDMGLGKTLQSI-CILAGDHCQRAQEYARSKLA 1321

  Fly   494 ESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHH 558
            |.....|                           |||||.:|...|..||....||:.|....:.
  Rat  1322 ECMPLPS---------------------------LVVCPPTLTGHWVDEVGKFCSREYLNPLHYT 1359

  Fly   559 G--NNRETKGKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCD 621
            |  ..|......::.::::|.:|.:|..:   :.....:|:...||||.||::|.|::.|.||..
  Rat  1360 GPPTERIRLQHQVKRHNLIVASYDVVRND---IDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQ 1421

  Fly   622 LRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWI-----------DNKSAGGQNRL 675
            |...||..|:||||||..|::::|..||...   .|.|.:::.           |.:|:..:...
  Rat  1422 LTANYRIILSGTPIQNNVLELWSLFDFLMPG---FLGTERQFAARYGKPILASRDARSSSREQEA 1483

  Fly   676 NLL-MKSL-------MLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFA 732
            .:| |.:|       :|||.|..:     |..||.|.::           :.|.|:......|:.
  Rat  1484 GVLAMDALHRQVLPFLLRRMKEDV-----LQDLPPKIIQ-----------DYYCTLSPLQVQLYE 1532

  Fly   733 QFLHQRAERETDFNYRS-----DANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLL 792
            .|...||:.:.|....|     :..||                         |.:...| :...|
  Rat  1533 DFAKSRAKCDVDETVSSAALSEETEKP-------------------------KLKATGH-VFQAL 1571

  Fly   793 LRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGDD 857
            ..||::|.||.|:          ....|....:|.|        |||:.::|....|       .
  Rat  1572 QYLRKLCNHPALV----------LTPQHPEFKNTTE--------KLAVQNSSLHDIQ-------H 1611

  Fly   858 GPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLD 922
            .|.|        .|.|.||............|...::|.|           .:.::..|..|:||
  Rat  1612 APKL--------SALKQLLLDCGLGNGTSSESGTESVVAQ-----------HRILIFCQLKSMLD 1657

  Fly   923 ILRDHLSK---DGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLL 984
            |:...|.|   ..|..|.|:|:||...|..||:.||: :....||||:...||:||||.||:.::
  Rat  1658 IVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNN-DPSIDVLLLTTHVGGLGLNLTGADTVV 1721

  Fly   985 LLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVS-S 1048
            .::..|||..:.||.||.:|:|||:.|.:|:.:...|:|::|.|||..|:::|:.|::....| .
  Rat  1722 FVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQ 1786

  Fly  1049 KLTIDDLKGLF 1059
            .:..|.|..||
  Rat  1787 SMGTDQLLDLF 1797

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	HepA	287..1041	CDD:440319	197/770 (26%)
		DEXHc_TTF2	439..686	CDD:350830	76/271 (28%)
Btaf1	NP_001426331.1	None