Protein Alignment lds and Iswi

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_523719.1
• Gene: Iswi / 36390
• FlyBaseID: FBgn0011604
• Length: 1027
• Species: Drosophila melanogaster
• Alignment Length: 685
• Identity: 175/685 - (25%)
• Similarity: 294/685 - (42%)
• Gaps: 201/685 - (29%)

  Fly   413 KDL----HVSLEDLPGPEVLAED------------PVGLKVSLM-NHQKHALAWM-SWRERKLPR 459
            ||:    |...|.....|:||||            |..:|...| ::|...|.|| |..|..:
  Fly    85 KDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGI-- 147

  Fly   460 GGILADDMGLGKTLTMISSVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRR 524
            .|||||:|||||||..||.:...|:.:..:
  Fly   148 NGILADEMGLGKTLQTISLLGYLKHFKNQA----------------------------------- 177

  Fly   525 GGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRETKGKYLRD------YDIVVTTYQIVA 583
            |..:|:.|.|.|:.|.:|.: |.......||:.  .:::|:..::||      :|:.||:|::..
  Fly   178 GPHIVIVPKSTLQNWVNEFK-KWCPSLRAVCLI--GDQDTRNTFIRDVLMPGEWDVCVTSYEMCI 239

  Fly   584 REHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKF 648
            || ||:...|  .||.:::||||.::|.||:.|..:.:.:...|..:||||:||...:::|||.|
  Fly   240 RE-KSVFKKF--NWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNF 301

  Fly   649 LRCSPFDDLHTWKKWIDNKSAGGQN----RLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIE 709
            |....|:....:.:|.:..:..|.:    ||:.::|..:|||.||:::...|    |.||:::.
  Fly   302 LLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLK----PKKEMKIF- 361

  Fly   710 ISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKD---PNGAYYKMHE 771
            :.|.|.:.:.|..|:                                  :||   .||
  Fly   362 VGLSKMQRDWYTKVL----------------------------------LKDIDVVNG------- 385

  Fly   772 KFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLN 836
                 ||..::::..:|   |::||:...||.|.|
  Fly   386 -----AGKVEKMRLQNI---LMQLRKCTNHPYLFD------------------------------ 412

  Fly   837 KLAITDTSTDGQQSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKT 901
                             ..:.|||...|              ::.|:|    |.|:.::.::|..
  Fly   413 -----------------GAEPGPPYTTD--------------THLVYN----SGKMAILDKLLPK 442

  Fly   902 SILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLL 966
              |:....:.::.||.|.:||||.|:..........|:|..|.::|...:.|||..|:.|.:.:|
  Fly   443 --LQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFML 505

  Fly   967 SLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQD 1031
            |..|||:|:||..|:.:::.|..||||::.||.||.:|:||||.|.:::.:...|||::|....:
  Fly   506 STRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 570

  Fly  1032 KKLDLADGVLTGAKV----SSKLTIDDLKGL--FG 1060
            .||.|...|:.|.::    |::|..|::..:  ||
  Fly   571 VKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFG 605

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	96/376 (26%)
		DEXDc	459..634	CDD:238005	50/180 (28%)
		HELICc	885..1014	CDD:238034	45/128 (35%)
Iswi	NP_523719.1	DBINO	<30..67	CDD:290603
		SNF2_N	131..411	CDD:278600	96/376 (26%)
		DEXDc	148..287	CDD:238005	50/179 (28%)
		HELICc	422..553	CDD:238034	48/150 (32%)
		HAND	697..796	CDD:286232
		SANT	797..838	CDD:197842
		SANT	799..838	CDD:238096
		SLIDE	853..965	CDD:286233

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467161
Domainoid	1	1.000	47	1.000	Domainoid score	I705
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840