Protein Alignment lds and M04C3.1

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_001368172.1
• Gene: M04C3.1 / 3565716
• WormBaseID: WBGene00010850
• Length: 1162
• Species: Caenorhabditis elegans
• Alignment Length: 1002
• Identity: 182/1002 - (18%)
• Similarity: 334/1002 - (33%)
• Gaps: 318/1002 - (31%)

  Fly   161 AEAVVPRYTTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDATTNKE 225
            |:.:.|..|...:|:|...:.|....:..|                    .|..||.:.|..|::
 Worm   145 AQKIAPLVTATESGSIFKRVASIFQKSPQE--------------------NIPGSTCNQANENQQ 189

  Fly   226 NMSGPPFERPSKSLSPR--------SSAGASVVKTSKN---LSQPTIQAVLKQKTSPAAPRRSRI 279
            .......::..:.|..|        :..|.....|:.|   :.|..|:.:|:|        ||..
 Worm   190 RRMSFKLDKKQEELMVRIAELENGENHGGIITTTTATNDLRIRQVLIEHILQQ--------RSLH 246

  Fly   280 KSEDQKVVSQVV---------YDEEMRKLAEKRVQVSDAEKLFEKVAHKLPDKGSQIMKRIDTLR 335
            |.|:.:....::         ::..:..:. |..|.:|...:|.....:.|...|...||....:
 Worm   247 KREESQANRTLIIGSPSWIKKFEGPLENIT-KSSQNNDFSFIFFNGIRRPPTLTSIRKKRKRAGK 310

  Fly   336 RELAMDEQWISALRVQQSNVP-----------AVRVVKPTLNPP-RA------------------ 370
            ..:.::..|:..::    |:|           .::.||....|| ||
 Worm   311 DIVLINYYWLETIQ----NLPVTWERIIFHDFTLKFVKSNTVPPFRALCKLKATFRWCITENHKQ 371

  Fly   371 --------PSIDTLDWDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKDLHVSLEDLPGPEV 427
                    ||:..:.:.:..|.:...|.:.                 |.||.:::.|     |..
 Worm   372 DRLVKFFNPSLGYISYFDAEEKMKSTKKIE-----------------EFLKRVNLYL-----PSA 414

  Fly   428 LAEDPVGLKVSLMNHQKHALAWMSWRERKLPRGGIL---ADDMGLGKTLTMISSVLACKNGQEMS 489
            ...|.:|..:.|  .||..:|.|..||....:|||:   .:|..:.:.:  |:.:|
 Worm   415 EPTDRIGFVLDL--KQKEMMASMEKREDGDDQGGIVTVATNDRQIDQVI--IAYIL--------- 466

  Fly   490 EGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKV-----SR 549
                            |:|:..|         :|:...|:|.....::.|:.:.:..:     :.
 Worm   467 ----------------KQREQGT---------SRKKVNLIVGTPMWMKSWKLQFDEFIKAGLLND 506

  Fly   550 QKLTVCVHHGNNRETKGKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQ 614
            ..||:...:...:......|...|||:|||..:.:| .:|.....|||.||||.||:.:.:..:.
 Worm   507 NDLTISYFYNRTKSRNSNELARNDIVITTYDTLKKE-ANLPIFKAVKWERIILYEANKISDMNTV 570

  Fly   615 SSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQN------ 673
            ...|:|.|:.||||.||.:|.|.      :|..||:...|.:.::.|   :.:|...||
 Worm   571 RFQAICQLQAKYRWCLTESPKQQ------SLSCFLKQESFGNGYSLK---NTESVKKQNNFKEDT 626

  Fly   674 ---RLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFL 735
               :.||:..|..|:                   |:.::|.|:..:               .:|:
 Worm   627 VKQQANLIFSSTELK-------------------LKTMKIVLNTRQ---------------KEFM 657

  Fly   736 HQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEK------FARMAGSKKEVKSHDILVLLLR 794
            :..|:.||.         ||..:|     |.|.|.|.      .|.:...|...:.:|||:
 Worm   658 NSMAQCETG---------PTNERI-----AAYGMEENEIGEAIIAFLLEQKYNSERNDILM---- 704

  Fly   795 LRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAI-----------TDTSTDGQ 848
                            ||....:.|...||....:..||:.:.|.|           .|...:.:
 Worm   705 ----------------GETLVVVSDAKMDSWLKHVKKLAKEDDLNIHNIHEEDHICEKDYIRENK 753

  Fly   849 QSV-----------------ANAGDDGPPLLPD------EARIAKASKNLLKRSNPVFNLHRPSS 890
            .|:                 ....::...|.||      |......|.:.|:.....| .....:
 Worm   754 TSMFIEWERIIFYGFSLHCAYKYQENRFQLYPDNCWYITEDITHLCSVHFLEAKERSF-FRTEEN 817

  Fly   891 KINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTI-PVKNRQDIVNEF 954
            ....:...::.|  |:.:.:....:.|.|:.....:...|        |..| ||||.:.:...:
 Worm   818 HFTFLTSAIQAS--KADEYRQFSNNMWQSIDSYTYEFFDK--------NFEIWPVKNDESLEEMY 872

  Fly   955 NDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCV 1019
                   .::.|.|:.....|.:     .|.:|:|||.  .|...|..:....:.:.|:.::
 Worm   873 -------EMMCLGLSGSAAALII-----RLWVDVHWNH--IACDYDSFFISRDEMDDIVARW--- 920

  Fly  1020 DTVEQRIKGLQDKKLDLADGVLTGAKV 1046
               ::.|..::|.::||...||...|:
 Worm   921 ---KKSIDLIEDAQIDLIRDVLVEKKL 944

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	81/385 (21%)
		DEXDc	459..634	CDD:238005	42/182 (23%)
		HELICc	885..1014	CDD:238034	22/129 (17%)
M04C3.1	NP_001368172.1	DEAD-like_helicase_N	<253..>366	CDD:421690	17/117 (15%)
		DEAD-like_helicase_N	428..606	CDD:421690	54/220 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910