Protein Alignment lds and Etl1

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_609320.2
• Gene: Etl1 / 34311
• FlyBaseID: FBgn0032157
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 1058
• Identity: 247/1058 - (23%)
• Similarity: 412/1058 - (38%)
• Gaps: 320/1058 - (30%)

  Fly    52 DETQSEEEESQSSETAESEKSDESDNSQNSQESEDSEDDSVRPSARNTKRKP----LGIPSDSED 112
            |.|.:....:.:|.:|:|..||......|...|      ||..|...|:|.|    :.:.:||:.
  Fly     3 DSTVAASASASASSSAKSSLSDLRQFRINKNAS------SVVASPSRTERVPGKKRIQVMADSDS 61

  Fly   113 EEDELEQRALSP-STRMSITGVRPQDLSDDDSEIEYSDEVQEGPTEAPTAEAVVPRYTTQFAGNI 176
            :.::.:    :| .|::.:|                   |:|.......|..:.|.:.|.   .|
  Fly    62 DGNDSQ----TPKKTKLELT-------------------VKEKEERYMAAAKISPHFDTM---AI 100

  Fly   177 QNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDATTN----KENMSGPPFERP-S 236
            |                                 |.||.|:.|...:    :||........| :
  Fly   101 Q---------------------------------ESLSRTNWDVAASVRYLRENCKPKGHNGPLA 132

  Fly   237 KS-LSPRSSAGASVVKTSKNLSQPTIQAVLKQKTSPAAPRRSRIKSEDQKVVSQVVYDEEMRKLA 300
            || |.|||: |.|....|.|                     .....:|.|.....|||.:
  Fly   133 KSKLKPRSN-GISGGNFSDN---------------------DHSDDDDVKQSKDQVYDSD----- 170

  Fly   301 EKRVQVSDAEKLFEKVAHKLPDKGSQIMKRIDTLRRELAMDEQWISALRVQQSNVPAVRVVKPTL 365
                                 |..|::..::...|:::.......|.:.:|.        || ||
  Fly   171 ---------------------DSDSEMSTKMTGQRKKVFQFMNEASLIELQS--------VK-TL 205

  Fly   366 NPPRAPSIDTL----DWDELSEAVNEIK---PVYTGAQGMATFNNQKALTLESLKDLHVSLED-- 421
            :..:|.:|..:    ||.:|.:.:..|:   .:...||.:....|..|..|....::...||.
  Fly   206 SEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKCNNMVSRLEKAI 270

  Fly   422 ------LPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVL 480
                  :..|::|:.   ||:  |.::|...|.|::.. .|....|||||:||||||:.:|:.:.
  Fly   271 SNGAGIVEQPKLLSS---GLQ--LADYQIIGLNWLTVM-HKQEMNGILADEMGLGKTIQVIAFLA 329

  Fly   481 ACK-NGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVE 544
            ..| ||                                    ..:...|:|.|:|.|..||:|
  Fly   330 YLKENG------------------------------------LSQAAHLIVVPSSTLDNWEAE-- 356

  Fly   545 SKVSR--QKLTVCVHHGN---NRETKGKYLRD----YDIVVTTYQIVAR--EHKSLSAVFGVKWR 598
              :||  .:|.|..:||:   .|..:|::.:|    :|:::|||.||..  |.:.:..|  .|..
  Fly   357 --ISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFRV--CKLD 417

  Fly   599 RIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLR----CSPFDDLHT 659
            .:|.||||:::|..:|....:..:..:.|..|||||:||..|::.:||.|:.    ....:|:.:
  Fly   418 YVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKS 482

  Fly   660 W--KKWIDNKSAGGQN-----------RLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEIS 711
            .  ||   .||.|.|:           |...:||..:|||.|..:     |.:|| |:|.|:|
  Fly   483 LFAKK---GKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDV-----LKNLP-KKLSLVE-- 536

  Fly   712 LDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARM 776
              |..|:..|.:.                               |:::.|    ||
  Fly   537 --KVPMSSQQKIY-------------------------------YHELVD----YY--------- 555

  Fly   777 AGSKKEVKSHDI---LVLLLRLRQICCHPGLI-----DAMLDGEESQTMGDHSSDSDTPEIDLLA 833
            :.:|.||.|...   :.:::.:|:|..||.|:     ||.|.| .|:.:.:.||...|.|..:..
  Fly   556 SNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRG-FSKRLANASSFKKTNEQYIFE 619

  Fly   834 QLNKLAITDTSTDGQ-QSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQ 897
            :|..:      :|.| ..:.|..:.....:||                   ||...|.|...:..
  Fly   620 ELAVM------SDFQVYQMMNKHEFYDVKIPD-------------------NLICDSGKFLYLDT 659

  Fly   898 ILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKR 962
            :|..  ||:...:.::.||:|.:|||:.::|.........|:|...|..|||::.:||. ::...
  Fly   660 LLPK--LKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNG-DDSIF 721

  Fly   963 VLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIK 1027
            |.|||..|||||:||..|:..::.|:.:||..:.||:||.:|:||::.|.||:.:...|:|:.|.
  Fly   722 VFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGIL 786

  Fly  1028 GLQDKKLDLADGVLTGAK 1045
            ...::||.|...:.:..|
  Fly   787 MAAEEKLKLEKDITSNEK 804

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	100/394 (25%)
		DEXDc	459..634	CDD:238005	52/186 (28%)
		HELICc	885..1014	CDD:238034	44/128 (34%)
Etl1	NP_609320.2	SNF2_N	292..587	CDD:278600	100/394 (25%)
		DEXDc	308..453	CDD:238005	52/186 (28%)
		Helicase_C	651..765	CDD:278689	40/116 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467148
Domainoid	1	1.000	47	1.000	Domainoid score	I705
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840