Protein Alignment lds and Marcal1

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_608883.1
• Gene: Marcal1 / 33709
• FlyBaseID: FBgn0031655
• Length: 755
• Species: Drosophila melanogaster
• Alignment Length: 910
• Identity: 177/910 - (19%)
• Similarity: 305/910 - (33%)
• Gaps: 280/910 - (30%)

  Fly   160 TAEAVVPRYTTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEILSSTDDDATTNK 224
            :|.|...:.||...|..|   |:..|.::..            ....::|:....|...:  ..|
  Fly    30 SAPATNGKSTTSATGATQ---HANNGKSNPN------------QPQAKSPLNFYRSPTGE--QKK 77

  Fly   225 ENMSGPPFERPSKSLSPRSSAGASVVKTSKNLSQPTIQAVLKQKTSPAAPRRSRIKSEDQKVVSQ 289
            .|.|||         :|..:..:|.:...|.:.|.:.:.:.:....|.  :|....:|..|....
  Fly    78 INRSGP---------TPGDNKSSSFLNALKAIKQTSNRELSRGAAHPY--QRPNGGNERNKPTLS 131

  Fly   290 VVYDEEMRKLAEKRVQV----SDAEKLFEKVAHKLPDKGSQIMKRIDTLRRELAMDEQWISALRV 350
            :..|:      ||.|.|    |....|:....|:...:.|             ...||.::..:
  Fly   132 LSSDK------EKPVAVLLGNSITCNLYLISTHRFAAQTS-------------GYHEQLVTVFK- 176

  Fly   351 QQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKDL 415
               |:|    .|......|..|.|..|:..|.....::|| |....|:.    :|.|      ||
  Fly   177 ---NMP----TKCYDGQTRIWSFDLSDYQSLKTHAADLKP-YVHMNGIP----KKVL------DL 223

  Fly   416 HVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVL 480
            ......:|...|||.....|...||..|:..:.:...::.::    ::.|:||||||...::
  Fly   224 CGQPPVVPERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRI----MICDEMGLGKTYQALA--- 281

  Fly   481 ACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVC-PASLLRQWESEVE 544
                          .:|...:|           |            .|:|| .||....|...:.
  Fly   282 --------------VADYFKDD-----------W------------PLLVCTTASTRDSWAKHIM 309

  Fly   545 SKVSRQKLTVCVHHGNNRETKGKYLRDYDIVVTTYQIVAR-EHKSLSAVFGVKWRRIILDEAHVV 608
            ..:.:    |.:|:.........|:.:..:::|:|.::.| |.|.:...||.    ||.||:|.:
  Fly   310 DLLPK----VPIHYVQVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGF----IIFDESHTL 366

  Fly   609 RNHKSQSSLAVCDL--RGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNK---- 667
            :|.|::.:.....|  :.|....|:|||..::.|:::..|:.:.....:.:....::.|.|
  Fly   367 KNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTF 431

  Fly   668 --SAGGQNRLN----LLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTY 726
              .|.||:.|.    :|....||||||.::
  Fly   432 GWDANGQSNLEELKVILHLKYMLRRTKVEV----------------------------------- 461

  Fly   727 SRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVL 791
                    |.|.||                                           |:.:.:||
  Fly   462 --------LPQLAE-------------------------------------------KNRETVVL 475

  Fly   792 LLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGD 856
                     .|.|:  ..:.|..:|:...:.:..|.:
  Fly   476 ---------DPALV--WTNAETKETLDAFNKELKTAK---------------------------- 501

  Fly   857 DGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVL 921
                        .:|::.:|.|    |.......|...|...|||  |.....|.|:.:....::
  Fly   502 ------------GRATEEILLR----FYARTAEVKTRAVCAYLKT--LVKEQKKFIIFAHHRVMM 548

  Fly   922 DILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLL 986
            |.:.|.||...|..:.::|.....:|.|.|:.|..:::.| |.||||.|...|:.|..|..::..
  Fly   549 DAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLTAAEIIVFA 612

  Fly   987 DLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVSSKLT 1051
            :|.|||...|||:.|.:|:||.|.||....:..:|.:..|..:...|.::...|...|:...|.|
  Fly   613 ELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVLSKVGIFAENLQKAT 677

  Fly  1052  1051
              Fly   678  677

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	63/376 (17%)
		DEXDc	459..634	CDD:238005	37/178 (21%)
		HELICc	885..1014	CDD:238034	42/128 (33%)
Marcal1	NP_608883.1	HARP	160..215	CDD:284784	14/76 (18%)
		DEXDc	239..420	CDD:214692	45/232 (19%)
		DEXDc	265..394	CDD:238005	37/180 (21%)
		Helicase_C	518..632	CDD:278689	37/116 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467229
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930