Protein Alignment lds and okr

DIOPT Version :9

• Sequence 1: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Alignment Length: 879
• Identity: 199/879 - (22%)
• Similarity: 326/879 - (37%)
• Gaps: 269/879 - (30%)

  Fly   237 KSLSP----------RSSAGASVVKTSKNLSQPTIQ----------AVLKQKTSPA---APRRSR 278
            :||:|          |.|....::|.:|...|..::          ..|:..::.:   .|.|..
  Fly     3 RSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFT 67

  Fly   279 IKSEDQKVVSQVVYDEEMRKLAEKRVQVSDAEKLFEKVAHKLPDKGSQIMKRIDTLRRELAMDEQ 343
            ..||.:..:::|:                 |.|....:.:.:||.|.   ||:..:||.::
  Fly    68 ANSEYELAIAKVL-----------------ARKFKVPMDNYVPDYGG---KRVLGVRRCIS---- 108

  Fly   344 WISALRVQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEI----KPVYTGAQGMATFNNQ 404
                                     |.|..|.:       |.|.:    .|.||..:.|. .:..
  Fly   109 -------------------------RRPLHDPM-------ACNALVLFHPPAYTEHERMG-MDPT 140

  Fly   405 KALTLESLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWM---SWRERKLPRGGILADD 466
            |.|       :||.::.|            |...|..||:..:.:|   ...:|....|.|:||:
  Fly   141 KVL-------VHVVVDPL------------LSNILRPHQREGVRFMYECVEGKRGNFNGCIMADE 186

  Fly   467 MGLGKTL---TMISSVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTL 528
            |||||||   |::.::|  :.|.|            .:...||                    .:
  Fly   187 MGLGKTLQCVTLVWTLL--RQGPE------------CKPTINK--------------------AI 217

  Fly   529 VVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRETKGKYLRDYDI----VVTTYQIVAREHKSL 589
            ||.|:||::.||.|. :|....:|......|..:|...:.|..:.:    :.|...:::.|...:
  Fly   218 VVSPSSLVKNWEKEF-TKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRI 281

  Fly   590 SAVFGVKWR--RIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCS 652
            .|....|:.  .:|.||.|.::|..:.:..|:..|:.|.|..|:||||||...:.|:|:.|:...
  Fly   282 YAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPE 346

  Fly   653 PFDDLHTWKKWIDNKSAGGQN----------------RLNLLMKSLMLRRTKAQLQSDGKLNSLP 701
            .......:|:..::....|||                .|..|:...::|||          |.:.
  Fly   347 MLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRT----------NQIL 401

  Fly   702 NKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAY 766
            .|.|.:      |.||.:...:......|:..||            :||       |::
  Fly   402 TKYLPV------KFEMVICAKLTAIQLELYTNFL------------KSD-------QVR------ 435

  Fly   767 YKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDL 831
                    |......|..|...|..:..|::||.||.||
  Fly   436 --------RSLADCNEKASLTALADITTLKKICSHPDLI-------------------------- 466

  Fly   832 LAQLNKLAITDTSTDGQQSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVI 896
               ..||...:...:..|:|          ||...:    .|:|    ||..     |.|. |::
  Fly   467 ---YEKLTAREKGFENSQNV----------LPSNYK----PKDL----NPEL-----SGKF-MLL 504

  Fly   897 QILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQK 961
            ..:..:|....:||.:::|.:|..||:......|.....:.|:||:.:|.|..:|:.|||..:..
  Fly   505 DFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDS 569

  Fly   962 RVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRI 1026
            .:.:||..|||.||||||||.|.:.|..|||..:.||..|::|.||||...||:.:...::|::|
  Fly   570 FLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKI 634

  Fly  1027 KGLQDKKLDLADGVLTGAKVSSK-LTIDDLKGLF 1059
            ...|..|..|:..::...:.:.| .|.||||.||
  Fly   635 LQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 668

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	87/390 (22%)
		DEXDc	459..634	CDD:238005	45/183 (25%)
		HELICc	885..1014	CDD:238034	46/128 (36%)
okr	NP_476661.1	SNF2_N	159..466	CDD:278600	87/390 (22%)
		DEXDc	179..328	CDD:238005	45/183 (25%)
		HELICc	493..622	CDD:238034	49/138 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467228
Domainoid	1	1.000	47	1.000	Domainoid score	I705
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840