DRSC/TRiP Functional Genomics Resources

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Protein Alignment lds and okr

DIOPT Version :10

Sequence 1:NP_524850.2 Gene:lds / 45894 FlyBaseID:FBgn0002542 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_557901.4 Gene:okr / 3291801 VectorBaseID:AGAMI1_012486 Length:791 Species:Anopheles gambiae


Alignment Length:856 Identity:198/856 - (23%)
Similarity:327/856 - (38%) Gaps:262/856 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 QAVLKQKTSPAAPRRSRIKSEDQKVVSQVVYDEEMRKLAEK----------RVQVSDAEKLFEK- 315
            ::::.|:.:|:....|..||   .:.:|....|..::|.:|          ::.||:.|.:..| 
Mosquito     3 KSLVPQRCTPSNAVHSPFKS---PLTAQKRQRECRKRLPDKGGTADHPPTPKLSVSEHELMIMKI 64

  Fly   316 --------VAHKLPDKGSQI--MKRIDTLRRELAMDEQWISALRVQQSNVPAVRVVKPTLNPPRA 370
                    :|:.:|:..::.  ||| ...||.| .|....:||.:              .:||..
Mosquito    65 LTQPFKIPIANYVPEHSTRCLGMKR-SAARRAL-HDPYACNALVL--------------FSPPEL 113

  Fly   371 PSIDTLDWDELSEAVNEIKPVYTGAQGMATFNNQKALTLESLKDLHVSLEDLPGPEVLAEDPVGL 435
            ...|.|..|                              :|...:||.::.|.|.          
Mosquito   114 TEHDKLKMD------------------------------KSKIQVHVVVDPLLGN---------- 138

  Fly   436 KVSLMNHQKHALAWM----SWRERKLPRGGILADDMGLGKTL---TMISSVLACKNGQEMSEGKD 493
              .|..||:..:.:|    :..:... .|.|:||:|||||||   |::.::|             
Mosquito   139 --ILRPHQREGVRFMYDCVTGAKGDF-NGCIMADEMGLGKTLQCITLLWTLL------------- 187

  Fly   494 ESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHH 558
                ..|.|.|....|::                 :|||:||::.|..|....:..:...:.:..
Mosquito   188 ----RQSPDCKPTINKAI-----------------IVCPSSLVKNWYKEFGKWLGCRVNCLSIDG 231

  Fly   559 GNNRETKGKYLRDY----------DIVVTTYQIV-AREHKSLSAVFGVKWRRIILDEAHVVRNHK 612
            |:..:|. |.|..|          .:::.:|:.. ...|...|:..|.    ::.||.|.::|.:
Mosquito   232 GSKEQTT-KELEQYMANQSQRHGTPVLIISYETFRLYAHILNSSEVGA----VLCDEGHRLKNCE 291

  Fly   613 SQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQN---- 673
            :.:..|:..|:.|.|..|:||||||...:.|:||.|:..........::|..:|....||:    
Mosquito   292 NLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTAEFRKQFENPILRGQDANST 356

  Fly   674 ------------RLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTY 726
                        .|..|:...|:|||.|.|          .|.|.:      |.||.|...:...
Mosquito   357 DAEREKAAERLQELAALVNRCMIRRTSALL----------TKYLPV------KFEMVVCVRMTEV 405

  Fly   727 SRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVL 791
            ...|:..||      ::|...||                   :.||.|..|       |...|..
Mosquito   406 QAALYKSFL------QSDTIRRS-------------------VMEKNATKA-------SLTALSN 438

  Fly   792 LLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGD 856
            :..|:::|.||.|:...:                                       |..|:..:
Mosquito   439 ITSLKKLCNHPDLVYEKI---------------------------------------QERADGFE 464

  Fly   857 DGPPLLPDEARIAKASKNLLKRSNPVFNLHRP--SSKINMVIQILKTSILKSSDDKAIVVSQWTS 919
            :...:|||         |...|.      .||  .:|: |::..:..||..::.||.::||.:|.
Mosquito   465 NAATILPD---------NYSPRE------LRPELGAKL-MLLDCMLASIKTNTTDKIVLVSNYTQ 513

  Fly   920 VLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLL 984
            .||:......|.|...:.|:||:.:|.|..:|::||..::...:.:||..|||.||||||||.|:
Mosquito   514 TLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNQPDSADFIFMLSSKAGGCGLNLIGANRLV 578

  Fly   985 LLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVSSK 1049
            :.|..|||..:.||..|::|.||||...||:.:...|:|::|...|..|..|:..|:..|:...:
Mosquito   579 MFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALSTTVVDNAEDGER 643

  Fly  1050 -LTIDDLKGLF 1059
             .|.||||.||
Mosquito   644 HFTQDDLKDLF 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ldsNP_524850.2 HepA 287..1041 CDD:440319 184/810 (23%)
DEXHc_TTF2 439..686 CDD:350830 63/280 (23%)
okrXP_557901.4 None

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