DRSC/TRiP Functional Genomics Resources

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Protein Alignment lds and brm

DIOPT Version :10

Sequence 1:NP_524850.2 Gene:lds / 45894 FlyBaseID:FBgn0002542 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_061518350.1 Gene:brm / 1272575 VectorBaseID:AGAMI1_001677 Length:1667 Species:Anopheles gambiae


Alignment Length:44 Identity:15/44 - (34%)
Similarity:20/44 - (45%) Gaps:12/44 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SAQLLNALSELEALQEGNQQLKMAEK---RRNKFE----FIRFG 83
            |.:|.|:|::.|.:.|     .||.|   ..|.|.    ||.||
Mosquito     9 SLELDNSLTDGETVHE-----MMAHKAGLTYNDFNILPGFINFG 47

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ldsNP_524850.2 HepA 287..1041 CDD:440319
DEXHc_TTF2 439..686 CDD:350830
brmXP_061518350.1 None
Blue background indicates that the domain is not in the aligned region.

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