DRSC/TRiP Functional Genomics Resources

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Protein Alignment lds and LOC1269656

DIOPT Version :10

Sequence 1:NP_524850.2 Gene:lds / 45894 FlyBaseID:FBgn0002542 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_061499833.1 Gene:LOC1269656 / 1269656 VectorBaseID:AGAMI1_004919 Length:3238 Species:Anopheles gambiae


Alignment Length:1072 Identity:199/1072 - (18%)
Similarity:354/1072 - (33%) Gaps:368/1072 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RSRKSSRLSKSSRLSKSSRPSSAGVVIDETQSEEEESQSSETAESEKSDESDNSQNSQESEDSED 89
            |:..:|..::||....:...|:|.     |...:.:||....|.:     |:...|||.|.:..:
Mosquito  1480 RNDYTSSYNQSSAYGSAGNTSAAA-----TGGYDHQSQYPYGANT-----SEGVANSQYSSNGSE 1534

  Fly    90 DSVRPSARNTKRKPLGIPSDSEDEEDELEQRALSPSTRMSITGVRPQDLSDDDSEIEYSDEVQEG 154
            ..::....|:........:.|....|:.:|:.                        :...:.|:.
Mosquito  1535 PGIQNPQSNSYWSDSANMNGSNSYYDQQQQQQ------------------------QQQQQQQQQ 1575

  Fly   155 PTEAPTAEA------VVPRYTTQFAGNIQNDLHSTIGAADSEVLDDSSGSDVLILSNKETPIEIL 213
            ||  ||.||      ..|.|...:.|                   .:.|:.    ..::.||   
Mosquito  1576 PT--PTNEANGGTGTPYPGYGAGYEG-------------------ANGGTQ----QQQQPPI--- 1612

  Fly   214 SSTDDDATT------NKENMSGPPFERPSKSLSPRSSAGASVVKTSKNLSQPTIQAVLKQKTSPA 272
             |||.:.::      |.|..|..  |.|| :::|:|....|.    .|.:.|        :|.||
Mosquito  1613 -STDQNGSSGMFNFPNAEQQSAA--EAPS-TVNPQSQTTPSY----DNFATP--------ETLPA 1661

  Fly   273 --APRRSRIKSEDQKVVSQVVYDEEMRKLAEKRVQVSDAEKLFEKVAHKLPDKGSQIMKRIDTLR 335
              .|:                :|.|............|||         ||...:          
Mosquito  1662 NGLPK----------------WDAEQSSNGNHSAVGGDAE---------LPQSQT---------- 1691

  Fly   336 RELAMDEQWISALRVQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEIKP---VYTGAQG 397
            .|.|:.||..:|.........|..||      |...|.:|          ||..|   ..|..|.
Mosquito  1692 AESAVTEQEATAASTTTPTTDAPLVV------PAQSSAET----------NESNPDAAAITQEQA 1740

  Fly   398 MATFNNQKALTLESLKDLHVSLEDLPGPEVLAEDP---VGLKVSLMNHQKHALAWMSWRERKLPR 459
            .|.:.||     .||:||:    |...|::..|.|   ||:.|..::.                 
Mosquito  1741 NAQYANQ-----PSLEDLN----DPVKPDLTGEKPPEIVGMDVKEIDK----------------- 1779

  Fly   460 GGILADDMGLGKTLTMISSVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRR 524
               |.|::.:.:.:.....|...|..:|....:.:..:.||...||:.:....|  .|...|.  
Mosquito  1780 ---LDDELEIKQEIKQEKEVEDIKGEKETESVQVKQEEQDSVVVKNEIKVEENG--EKIANDA-- 1837

  Fly   525 GGTLVVCPASLLRQWESEVESK-----VSRQKLTVCVHHGNNRETKGKYLRDYDIVVTTYQIVAR 584
            .|.:...||..:::.|...||.     :.:::||                .|.:|.....|..:.
Mosquito  1838 CGDMPDKPAGEVKEEEKLTESSEDVKPIKKEELT----------------EDVEIKQEDEQKPST 1886

  Fly   585 EHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFL 649
            |.:::.::...|     :||..||.                          :.:|:::       
Mosquito  1887 EGETIKSMEEKK-----VDEDSVVD--------------------------KKEEIEI------- 1913

  Fly   650 RCSPFDDLHTWKKWIDNKSAGGQNRLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDK 714
               |          |:.|.|..|.              ..:.::..::..:..::::||....|.
Mosquito  1914 ---P----------IEKKEAADQE--------------AEEAKAKEEVEKVVEEDVKLIVKDADG 1951

  Fly   715 EEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGS 779
            ||                                         ::||                 .
Mosquito  1952 EE-----------------------------------------KLKD-----------------D 1958

  Fly   780 KKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDH--SSDSDTPEIDLLAQLNKLAITD 842
            ..:::..:::|                 .::.:||.|....  |:.|.|........:.....|.
Mosquito  1959 TTQLEEGEVVV-----------------KVEEKESPTADKDPLSTTSTTTSTTTSTTITTTTTTT 2006

  Fly   843 TSTDGQQSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSS 907
            |:|.|.:.  ..|.|....:|.|...     .|:|...|  :|...|.|:::...||:.||  ..
Mosquito  2007 TATAGTKE--GKGKDAKDEIPYEWAF-----ELMKGYIP--DLLENSPKMDIFFCILEESI--RL 2060

  Fly   908 DDKAIVVSQWTSVLDILRDHLSKD-----------GVATLSLNGTIPVKNRQDIVNEFNDRNNQK 961
            .|:.:|.||....|:::...|..:           .::...|:|:...:.|:.::||||. |...
Mosquito  2061 GDRLLVFSQSLLTLNLIERFLQHNKIPGTENYWAKNISYFRLDGSTVAQEREKLINEFNS-NPNV 2124

  Fly   962 RVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRI 1026
            .:.|:|..||.:|:||:|||.:::.|..|||..:.||..|:||.||||...:|:.:..:.:|::|
Mosquito  2125 HLFLVSTRAGSLGINLVGANRVVVFDASWNPCHDTQAVCRVYRYGQKKPCFVYRLVMDNCLEKKI 2189

  Fly  1027 KGLQDKKLDLADGVLTGAKVSSKLTIDDLKGL 1058
            ...|..|..::|.::......:.|::.::..|
Mosquito  2190 YDRQINKQGMSDRIVDECNPDAHLSMKEITSL 2221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ldsNP_524850.2 HepA 287..1041 CDD:440319 147/777 (19%)
DEXHc_TTF2 439..686 CDD:350830 35/251 (14%)
LOC1269656XP_061499833.1 None

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