DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kkv and Chs2

DIOPT Version :9

Sequence 1:NP_524233.1 Gene:kkv / 45884 FlyBaseID:FBgn0001311 Length:1615 Species:Drosophila melanogaster
Sequence 2:NP_524209.3 Gene:Chs2 / 40442 FlyBaseID:FBgn0029091 Length:1393 Species:Drosophila melanogaster


Alignment Length:1592 Identity:634/1592 - (39%)
Similarity:868/1592 - (54%) Gaps:273/1592 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DIYGGSQRTIQETKGWDVFRDPPIKIETGSTANQECLELTVKILKIFAYVITFIIVLTGGVIAKG 107
            |.:..|::...:...||.|:|||.|..:||.|:.:.|:..:|:.||..|::.|.:||...|.|..
  Fly    10 DYFMRSRKQRDKPSLWDSFQDPPSKKTSGSDADWKKLQFCLKLFKICTYLLVFAVVLATSVFANL 74

  Fly   108 TMLFMTSQV-RKDKKMEYCNK-DLGRDKSFVVRLPEEERVAWIWALLIAYALPEIGALIRSARIC 170
            ..|:|.... ....:::.|:| .:.|.........|.:::||:|||:.|:|.||:...:|:.|||
  Fly    75 IYLYMAGNTGGTGPRVQVCSKYPVLRHGQVEAVASELDQIAWVWALIFAFAAPELLTFLRALRIC 139

  Fly   171 FFKTFKVPKTGHFLFVWLMESLSAVGMALLMFVVLPQIDAIQGAMLTNCLCVVPGIFGLLSRTSK 235
            .||..:.|.......|.|.|.|..||:|||.|.|||.:|..:||:|..|:|.||.:..||:.|..
  Fly   140 MFKREQRPSGLEVGLVTLFELLHVVGLALLTFTVLPALDVTRGAILGCCVCFVPALLNLLTGTRV 204

  Fly   236 EGKRFVKVIIDLA--AVAAQVTGLVIWPLLENRRELWVIPVACVMISCGWWENYVSPQSPLG-LV 297
            ..:....:::.|:  |:.||.:..::||.|.:..|:.::.:..::||..||||:.:....:. ::
  Fly   205 RWRSADSLVLGLSILALVAQGSVFLVWPSLSDSMEVQLLAIPLLLISFRWWENFANTHEAIAYII 269

  Fly   298 RALGRIKEEMKYTRYFCHIFLSIWKILLFFTVTLLIYWAQGEEPGNLFAMYGDAFGPHKIIVYEL 362
            |.:     ....:||..:::|:..|:|:|..:..:::   |.|....|..:.||:.||.|.:.:.
  Fly   270 RTI-----RCTRSRYHTYLYLAPLKVLVFAGMGFILH---GHEFVEYFGRFRDAWRPHLITLVQS 326

  Fly   363 PAGLGGVLPDT--LESANIDTV--------DVDAAYNTVVYVLLLQIFGAYLCYIFGKFACKILI 417
            ...     ||.  |..||:...        .:.::.|:|.|.|..|:..||||:|||||||||.|
  Fly   327 NGD-----PDALLLAQANVSITAPPRRTLFTMQSSPNSVFYALAAQVGAAYLCHIFGKFACKIKI 386

  Fly   418 QGFSYAFPVSLTVPLSVTFLIAACGIRIDDPCFFHDTIPDYLFFTSPSNFRFNNFVTE------- 475
            |.||||.|:||..|.:|..:.....:|..|||..|..:||||     |.......|.|       
  Fly   387 QKFSYALPLSLAGPATVCLVTFLAQLRASDPCSLHGFMPDYL-----SLLALGGSVEELGQRCLD 446

  Fly   476 QMAWAWILWLLSQTWIALHIWTPKCERLATTEKLFVQPMYSSLLIDQSMALNRRRDDQADVKTED 540
            ...|.|.||.|:|.|..||||.|..:|.|.||||||.|.|..||:||...:|||..|.::     
  Fly   447 YALWLWPLWWLAQVWTCLHIWQPHNDRNAPTEKLFVCPWYCGLLVDQCSMMNRRIVDWSE----- 506

  Fly   541 LSEIEKEKGDEYYETISVHTDRSSAPNKP------------SIKSSDNITRIYSCATMWHETKDE 593
                         |.:::.:| .:||..|            .|:..|.:.::..||||||||:||
  Fly   507 -------------EYLAIKSD-LTAPRDPVVALAADINASRDIQEEDKVPQLIVCATMWHETEDE 557

  Fly   594 MIEFLKSIMRMDEDQCARRVAQKYLR--VLDPDYYEFETHIFFDDAFEISDHSDDDIQC------ 650
            |:||||||:|:||||||||:|:.:|.  ..|.:|||.||:||||||| :||..    ||      
  Fly   558 MMEFLKSIVRLDEDQCARRMARTHLNGGKADDEYYELETNIFFDDAF-VSDPR----QCQNKRNP 617

  Fly   651 --NRFVKLLIATMDEAASEIHQTTIRLRPPKKYPTPYGGRLVWTLPGKTKFITHLKDKDRIRHRK 713
              |.:||.|..|:|:||.|::...||::||.|..|||||||||||||:||.:.|||:||:|||:|
  Fly   618 PINEYVKTLTRTIDKAAFEVYGVNIRIKPPLKIETPYGGRLVWTLPGRTKMVAHLKNKDKIRHKK 682

  Fly   714 RWSQVMYMYYLLGHRLMEL-PISVDRKDAIAENTYLLTLDGDIDFKPNAVTLLVDLMKKNKNLGA 777
            |||||||||||||:|:||. .:|..||..|||||::|.|||||||:|.||.||:|.||....|||
  Fly   683 RWSQVMYMYYLLGYRIMETKELSPRRKAVIAENTFILALDGDIDFQPRAVRLLIDRMKAVDELGA 747

  Fly   778 ACGRIHPVGSGPMVWYQLFEYAIGHWLQKATEHMIGCVLCSPGCFSLFRGKALMDDNVMKKYTTR 842
            |||||||||.|||||||.|||||||||||||||:|||||||||||||||..|||:::|||:||..
  Fly   748 ACGRIHPVGRGPMVWYQRFEYAIGHWLQKATEHVIGCVLCSPGCFSLFRASALMENSVMKRYTMI 812

  Fly   843 SDEARHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHCPEGFNEFYNQRRRWVPSTIANIMD 907
            |.||...||||||||||||||||:.|.||||.||||||||.||.|||||||||||||||||||.|
  Fly   813 SSEAMKMVQYDQGEDRWLCTLLLKAGSRVEYCAASDAYTHAPESFNEFYNQRRRWVPSTIANIFD 877

  Fly   908 LLADAKRTIKINDNISLLYIFYQMMLMGGTILGPGTIFLMLVGAFVAAFRIDNWTSFHYNIVPIL 972
            :||||...:|.|::||.:|::||.|||.||:|||||||||:|||.||.|.||.||:|.:|..|||
  Fly   878 ILADADTVVKKNNSISTMYVWYQGMLMIGTVLGPGTIFLMMVGALVAVFSIDIWTAFLWNFFPIL 942

  Fly   973 AFMFICFTCKSNIQLFVAQVLSTAYALIMMAVIVGTALQLGEDGIGSPSAIFLISMVGSFFIAAC 1037
            .|:..|...|...||.:|.|:|:.|.|:||||::|..:|:.|||..:|:::|.:.:.....||..
  Fly   943 LFILACVYLKQKFQLLIAFVISSVYCLVMMAVLIGIIVQMLEDGPLAPASLFFLLVAVQITIAGF 1007

  Fly  1038 LHPQEFWCITCGLIYLLSIPSMYLLLILYSIINLNVVSWGTREVVAKKTKKELEAEKKAAEEAKK 1102
            :||||||.:.||:||.::|||||:||:::|:.|:|.|||||||....|                 
  Fly  1008 MHPQEFWALLCGVIYYITIPSMYMLLMIFSVFNMNDVSWGTREAPVLK----------------- 1055

  Fly  1103 RVKQKSMLSFLQSGIGDNGDEEGSVEFSLAGLFRCIFCTHGKTSDEKQQLTSIAESLDTIKHRMD 1167
                            |:|                                              
  Fly  1056 ----------------DDG---------------------------------------------- 1058

  Fly  1168 TIESAVDPHGHHASRHGRRRTTSSGSKDHHLLTSVAEKSGDESDESDSDTSAEPKQERDFLTNPY 1232
              :.|||                                                :..::|  |.
  Fly  1059 --KDAVD------------------------------------------------EANNYL--PG 1071

  Fly  1233 WIEDPDVRKGEVDFLSSTEIQFWKDLIDQYLYPIDNDPVEQARIAKDLKELRDSSVFAFFMINAL 1297
            |:.||.:...|:..:|..|.:||||||.|||.|::....::..:|..|||||:...|||.|:||:
  Fly  1072 WLNDPLLIDSELGEVSLMEQRFWKDLIKQYLKPLELSREQKQAMADGLKELRNMIAFAFVMVNAI 1136

  Fly  1298 FVLIVFLLQLNKDNIHVKWPFGVRTNITYDESTQEVHISKEYLQLEPIGLVFVFFFALILIIQFT 1362
            ||||||||||.|:.:|::||......:::|.....|.|.::|.:|:||||.||.||.|||||||.
  Fly  1137 FVLIVFLLQLKKEFLHLEWPIDPTDFVSFDRDNLMVGIYRQYKELDPIGLCFVIFFGLILIIQFL 1201

  Fly  1363 AMLFHRFGTISHILASTELNFCKKKSEDLTQDQL--IDKHAVEIVKNLQRLQGI-----DGD--Y 1418
            ||.||||.|:..:||:|::::.:...:...:|..  :...||.|.:.|||.:.:     |||  |
  Fly  1202 AMFFHRFATLCQLLATTQVDWFRTGGQFTDEDAATELKGSAVSIARKLQRPKRLFDDDEDGDPHY 1266

  Fly  1419 DN---DSGSGPDR--IARRKTIQNLEKARQPRR-QIGTLDVAFKKRFLKLTADAENNPATPILTR 1477
            |.   ||..|..|  :.||:||..|.:.|..:. ....|...|::||.   .|.|.|      .:
  Fly  1267 DEVLMDSLEGEHRESMVRRQTIFRLHETRDKQHSDYSNLVFNFERRFF---GDDELN------LK 1322

  Fly  1478 RLTMRAETIRALEVRKNSVMAERRKSAMQTLGAKNEYGITTGAPINNNGALPN--QRSGRVSNAG 1540
            .|.:..::::.|:        |||.:|.....|..|     |.|....|..|.  ..:.:||   
  Fly  1323 NLALNRKSVKLLQ--------ERRSAAKVNAAATPE-----GTPTPKAGKRPPVVPMAKKVS--- 1371

  Fly  1541 ISIKDVFNVNGGGAEQIYGSNGGGTINQGYEH 1572
                  |..:......:|.       |.||||
  Fly  1372 ------FTASNRNNMALYD-------NGGYEH 1390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kkvNP_524233.1 Chitin_synth_C 583..904 CDD:133033 230/331 (69%)
Chs2NP_524209.3 Chitin_synth_C 546..874 CDD:133033 230/332 (69%)
SLC5-6-like_sbd 903..>1055 CDD:294310 78/151 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 315 1.000 Domainoid score I1253
eggNOG 1 0.900 - - E1_COG1215
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 693 1.000 Inparanoid score I664
Isobase 1 0.950 - 1.04027 Normalized mean entropy S6948
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D124503at2759
OrthoFinder 1 1.000 - - FOG0003454
OrthoInspector 1 1.000 - - mtm6358
orthoMCL 1 0.900 - - OOG6_103357
Panther 1 1.100 - - P PTHR22914
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2067
SonicParanoid 1 1.000 - - X2824
1211.850

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