DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and MCH5

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_014951.4 Gene:MCH5 / 854483 SGDID:S000005833 Length:521 Species:Saccharomyces cerevisiae


Alignment Length:449 Identity:117/449 - (26%)
Similarity:182/449 - (40%) Gaps:80/449 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PDGGARAWLVMVSAFLCNGII--FGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            |:||.:||:|....||  |:|  ||.:|:.|||.|.|.|      :..:|...:.||.|.  :.|
Yeast   100 PEGGFKAWVVTFGCFL--GLIACFGLLNSTGVIESHLQD------NQLSSESVSTIGWLF--SLF 154

  Fly   137 LFSTMAGCLT-----DKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALY---FTYGIMFGLGAAL 193
            ||...|.|:.     |:.|.|.....|.|....||    |.|.|....:   .::.|:.|.|..:
Yeast   155 LFVCSASCIISGTYFDRNGFRTIMIVGTVFHVAGL----FATANSTKYWHFILSFAIVCGFGNGI 215

  Fly   194 AYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLG-------SYGLEGTLRIMSLV 251
            ..:|.:::..|||.:..|......|.|.||..|:.|..|.....       :||....:|.:..:
Yeast   216 VLSPLVSVPAHYFFKRRGTALAMATIGGSVGGVVFPIMLRSFFSMKSDTDPTYGFVWGIRTLGFL 280

  Fly   252 SAFIILCSFVYKPLHPPPEPPKKKPGRSRINLFLRSIINVEIWKRKRF--VIWALCVPLALFG-- 312
            ...::..|.:......|......|.|.||....||..| ::.:..|.|  :.:..||...:|.  
Yeast   281 DLALLTLSIILVKERLPHVIENSKDGESRWRYILRVYI-LQCFDAKAFLDMKYLFCVLGTVFSEL 344

  Fly   313 -------YFVPYVHMMQFVKTTFPGEDVNLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSL 370
                   |:..|.     ........|....:|.|.:....||.:.|.::|..|  |..:...:|
Yeast   345 SINSALTYYGSYA-----TSHGISANDAYTLIMIINVCGIPGRWVPGYLSDKFG--RFNVAIATL 402

  Fly   371 VSIGLVTLL--LP----LTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIG---- 425
            :::.:|..:  ||    |||.|||    :.:.|...|...||| |:.   ||....|:..|    
Yeast   403 LTLFIVMFVGWLPFGTNLTNMYVI----SALYGFCSGSVFSLL-PVC---CGQISKTEEFGKRYS 459

  Fly   426 ---FLLGLSSIPLTVGPPVAGMIFD--STNSYTLPLILAGLPPLLGSSLLFLIK---CV 476
               |::|..::   ||.|:.|.|..  :|..|...:|..||...: |::.::|.   ||
Yeast   460 TMYFVVGFGTL---VGIPITGAIISIKTTADYQHYIIFCGLATFV-SAVCYIISRAYCV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 107/420 (25%)
MFS_1 124..439 CDD:284993 84/353 (24%)
MCH5NP_014951.4 MFS_MCT_SLC16 106..510 CDD:340910 112/437 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9209
orthoMCL 1 0.900 - - OOG6_100246
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5423
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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