DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and MCH4

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_014522.1 Gene:MCH4 / 854030 SGDID:S000005479 Length:501 Species:Saccharomyces cerevisiae


Alignment Length:418 Identity:104/418 - (24%)
Similarity:182/418 - (43%) Gaps:50/418 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLT-DRLTKLGDPEASSKAALIGALAIGT 134
            :|.||||.:||||:..||:....:||.||:.|.|.|.:: .:|..:    :||..:.|.:|.:..
Yeast    87 REFPDGGLKAWLVVFGAFMGLVPVFGLINSLGAIESYISKHQLANI----SSSTISWIFSLYLAI 147

  Fly   135 TFLFSTMAGCLTDK---IGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYT 196
            :||...::|...|:   |||..|   |.|:.||||...:.| :::......:.:..|||..:..|
Yeast   148 SFLSCILSGGYFDRNGSIGLMCT---GTVIYAGGLFALANC-KSVWQFILAFSVCSGLGTGILMT 208

  Fly   197 PTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFV 261
            |.:..:..:|.:..|..:...|.|.|:..::.|..|.||....|.:..:||:|.:....::|:.|
Yeast   209 PLIGTVATWFLKRRGIATSISTMGGSIGGIVFPIMLRKLYKEVGFQWAIRILSFICLTCLICASV 273

  Fly   262 YKPLHPPPEPPKKKPGRSRINL---FLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQF 323
               |......|..:|.:|:..:   ::.|:.|...:...:|:..|:....|.........::..:
Yeast   274 ---LARERTKPVVQPFKSKAEVAKWYISSVFNWRYFLEGKFLFVAIGASFAESSLTSCATYLASY 335

  Fly   324 VKTTFPGEDVNLPVMCIGITSGI-GRLIFGVIAD-MPGVNRMYLQQLSLVSIGLVTLLLPLTNSY 386
            ..|....|:|...::......|| ||.|.|..|| ..|...:.:..:|:.::....:.||...:.
Yeast   336 SMTRGNTENVAYTMITASNAVGILGRYIPGYFADKFIGRFNVEIITISMAALFNFVMWLPFGGNT 400

  Fly   387 VILVSFTLVMGLFDGCFISLLGPIAYEIC-GPSGATQAIG-------FLLGLSSIP-LTVGPPVA 442
            .:|.::..:.|...|..:||.     .:| |....|...|       .|..|.:|| |.:|..:.
Yeast   401 KVLWAYVCLWGFSTGSILSLT-----PVCIGQISKTTDFGKRYATVYLLQALVTIPVLPIGGTLI 460

  Fly   443 G----------MIFDSTNSYTLPLILAG 460
            |          :||:|.      |:.||
Yeast   461 GKGTVANYNHFIIFNSA------LMAAG 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 96/405 (24%)
MFS_1 124..439 CDD:284993 75/331 (23%)
MCH4NP_014522.1 MFS_MCT_SLC16 96..490 CDD:340910 99/409 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I2205
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9209
orthoMCL 1 0.900 - - OOG6_100246
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.810

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