DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and MCH2

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_012701.2 Gene:MCH2 / 853659 SGDID:S000001704 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:507 Identity:114/507 - (22%)
Similarity:188/507 - (37%) Gaps:129/507 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HTASATNGLVHANGKDAMKPSAPVQNGNGNANGTHIEAPCCRDIHGKEPPDGGARAWLVMVSAFL 89
            |.....|.| :.||||.:         |||   |.|..         |.|||| ..|.::::..|
Yeast     9 HHRDVENKL-NLNGKDDI---------NGN---TSISI---------EVPDGG-YGWFILLAFIL 50

  Fly    90 CNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKA--ALIGALAIGTTFLFSTMAGCLTDKIGLR 152
            .|...:|..:.|.:..:...:..|..|    .||.  |.||.||......|:.:...|.....::
Yeast    51 YNFSTWGANSGYAIYLAHYLENNTFAG----GSKLDYASIGGLAFSCGLFFAPVITWLYHIFSIQ 111

  Fly   153 LTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILGHYFKRYLGKVSGFV 217
            .....|.:.....|||::| :..:..:|.|.|::.|.|.|..:.|::.::..:|:......||..
Yeast   112 FIIGLGILFQGAALLLAAF-SVTLWEIYLTQGVLIGFGLAFIFIPSVTLIPLWFRNKRSLASGIG 175

  Fly   218 TAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLHPPPEPPKKKPGRSRIN 282
            ||||.:..::....:..:|...|::..|      .|..|:|:.:                 |.|.
Yeast   176 TAGSGLGGIVFNLGMQSILQKRGVKWAL------IAQCIICTSL-----------------STIA 217

  Fly   283 LFLRSIINVEIWKRKR--------------FVIWAL--CVPLALFGYFVPYVHMMQF-VKTTFPG 330
            |.|....:..:.:.||              |.:|.|  .|..|:.||.|....:..| |...:..
Yeast   218 LMLTRTTHQGLRQHKRSYKFELLDYDVLSNFAVWLLFGFVSFAMLGYVVLLYSLSDFTVSLGYTS 282

  Fly   331 EDVNLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLV 395
            :..:.....:.:.|.:||.|.|.|||..|          .:::|::               ..||
Yeast   283 KQGSYVSCMVSVGSLLGRPIVGHIADKYG----------SLTVGMI---------------LHLV 322

  Fly   396 MGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAG 460
            |.:.  |:...:.      |.......|.|.|:|  ||..|:.|.:|.::       |..:.|..
Yeast   323 MAIL--CWAMWIP------CKNLATAIAFGLLVG--SIMGTIWPTIASIV-------TRIVGLQK 370

  Fly   461 LPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIA-----GNGHYRSA 507
            ||...||:.:|:            |..|:|.....:|:.     ||.:||:|
Yeast   371 LPGTFGSTWIFM------------AAFALVAPIIGLELRSTDTNGNDYYRTA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 82/396 (21%)
MFS_1 124..439 CDD:284993 70/333 (21%)
MCH2NP_012701.2 MFS_MCT_SLC16 41..428 CDD:340910 97/452 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100246
Panther 1 1.100 - - O PTHR11360
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.900

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