DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and Slc16a3

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_110461.1 Gene:Slc16a3 / 80878 RGDID:620603 Length:471 Species:Rattus norvegicus


Alignment Length:444 Identity:117/444 - (26%)
Similarity:200/444 - (45%) Gaps:51/444 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGT 134
            |.:.|||| ..|.|:...|:..|..:.|.....|....|.... .:|..:.:..::::.|:..||
  Rat    12 GIKAPDGG-WGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEF-GIGYSDTAWISSILLAMLYGT 74

  Fly   135 TFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTL 199
            ..|.|.   |: ::.|.|.....||:.::.|::.:||| .:|..:|.|.|::.|||.||.:.|:|
  Rat    75 GPLCSM---CV-NRFGCRPVMLVGGLFASLGMVAASFC-RSIIQIYLTTGVITGLGLALNFQPSL 134

  Fly   200 AILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKP 264
            .:|..||.:.....:|...|||.||...|.|....|...||..|...|:..:.....:|:.:.:|
  Rat   135 IMLNRYFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAALMRP 199

  Fly   265 LHPP-------PEPPKKKPGRSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQ 322
            |..|       |..|::...|         ::::.:::.:.|:|:|:...:.:.|.|||.|.::.
  Rat   200 LVAPQASGGAEPHGPQRPSPR---------LLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVS 255

  Fly   323 FVKTTFPGEDVNLP-------VMCIGITSGIGRLIFGVIADMPGVN--RMYLQQLSLVSIGLVTL 378
            :.|      |:.:|       :..:|......|...|.|..:..|.  .:||...::...|...|
  Rat   256 YAK------DMGVPDTKAAFLLTILGFIDIFARPTAGFITGLKKVRPYSVYLFSFAMFFNGFTDL 314

  Fly   379 LLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYE----ICGPSGATQAIGFLLGLSSIPLTVGP 439
            .....:.|..||.|.:..|:..|    ::|.:.:|    |.|....:.|||.:|.|.::.:.:||
  Rat   315 TGSTASDYGGLVVFCIFFGISYG----MVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGP 375

  Fly   440 PVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIK---CV-KEEENGVSAPRAV 489
            |..|.:.|:|..|....|||| ..:|.|||:.|:.   |: |.:...|:.|..|
  Rat   376 PSGGKLLDATKVYKYVFILAG-AEVLTSSLVLLLGNFFCIGKRKRPEVTKPEEV 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 99/397 (25%)
MFS_1 124..439 CDD:284993 83/334 (25%)
Slc16a3NP_110461.1 MFS_MCT3_4 21..410 CDD:340988 107/414 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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