DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and slc16a9a

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_956704.1 Gene:slc16a9a / 795588 ZFINID:ZDB-GENE-040426-1364 Length:512 Species:Danio rerio


Alignment Length:481 Identity:142/481 - (29%)
Similarity:211/481 - (43%) Gaps:101/481 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFS 139
            ||| ..|:::|::|:...:.||...:.||::   .:.|:..  .|.....|.:|::..|...:.|
Zfish    11 DGG-WGWMIVVASFMAQFLSFGSPQSVGVLY---PEWLSAF--QEGKGMTAWVGSMVSGVALITS 69

  Fly   140 TMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILGH 204
            .:.....|..|.|..|...||:.||||:||:| ..||..|.|:|||:.|:|..|.|..||.|...
Zfish    70 PVCSACVDNFGARPVTIFSGVMVAGGLMLSAF-APNISFLIFSYGIVVGMGCGLVYAATLTITCQ 133

  Fly   205 YFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLHPP- 268
            ||.:..|...|.||.|:||...|.....::|:..:||||.|.|:..::..::.|:...:||:.| 
Zfish   134 YFDKRRGLALGIVTTGTSVGGFIYATLQNELIELFGLEGCLLIIGALALNLMACAGPMRPLNLPG 198

  Fly   269 --------------PEPPKKKP---------------------------------------GRSR 280
                          |||...||                                       |..:
Zfish   199 YYLKQRAALQRTEDPEPLYSKPTAIIIESGSDLKTKPGLAENTTTVKLLINKDPTELQDSEGERK 263

  Fly   281 INLFLRSII--NVEIWKR-------------KRFVIWALCVPLALF--GYFVPYVHMMQFVKTTF 328
            :::...|||  .::.|.|             :..|..|.|:.:.||  |.|.|.:.|        
Zfish   264 VHILSSSIIARAIKKWMRPYGQYFCETVELLQDRVFMAFCIAMFLFSLGAFPPVLFM-------- 320

  Fly   329 PGEDVN-----------LP-VMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLP 381
              |||.           :| |..:.:|:|||:||.||:|||..||.:||..|:|:..|...||:|
Zfish   321 --EDVAQSEGLIDGIALIPLVSIVAMTTGIGKLILGVLADMRWVNSLYLYALTLIGSGTALLLIP 383

  Fly   382 LTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIF 446
            ::.||:.|...:..:|.|.|.: ||...|..:|.|.....||.|.|:......:.:||||.|..|
Zfish   384 VSKSYLGLQILSAAVGFFSGNW-SLTSYITTKIVGIERLGQAHGILMCFGGFGIALGPPVVGWFF 447

  Fly   447 DSTNSYTLPLILAGLPPLLGSSLLFL 472
            |.|.||.|...|:|...|:....|||
Zfish   448 DWTQSYDLAFYLSGTCVLVSGVFLFL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 133/460 (29%)
MFS_1 124..439 CDD:284993 113/397 (28%)
slc16a9aNP_956704.1 2A0113 11..493 CDD:273325 142/481 (30%)
MFS 19..473 CDD:119392 136/470 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.