DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slc16a13

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_001920250.3 Gene:slc16a13 / 793210 ZFINID:ZDB-GENE-120907-2 Length:502 Species:Danio rerio


Alignment Length:495 Identity:124/495 - (25%)
Similarity:217/495 - (43%) Gaps:56/495 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 EAPCCRDIHGKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAA 125
            :.||.:.    ..|||| ..|:|:.:.|:.:.::||.|.:.||.........     .|::...:
Zfish    11 QRPCPQG----AAPDGG-WGWVVVGALFVISALVFGLIRSLGVFFVEFVQYF-----DESAQAVS 65

  Fly   126 LIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLG 190
            .|.::.:....|.|.:....::..|.|.....||.||..|.:|:|..| ::..||.|.|::.|||
Zfish    66 WITSIGLAMQQLMSPIGAAASNVYGTRPVVMMGGFLSGLGFILASQAT-SLLHLYLTMGLISGLG 129

  Fly   191 AALAYTPTLAILGHYF--KRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSA 253
            .||.:|||:|.:..||  :|.|....||...|.:.|.  ..|....|:.:|...|.|.|:..:|.
Zfish   130 WALVFTPTMASVMQYFTKRRSLAMGLGFTGVGLASFA--FSPLFQYLVEAYAWRGALLILGGLSF 192

  Fly   254 FIILCSFVYKPLHPPPEPPKKKPGRSRIN--LFLRSII----NVEIWKRKRFVIWALCVPLALFG 312
            .::.|..:.:|| ..|:...|....:::|  .||.|.|    .:.:...:.||.:|:.:.....|
Zfish   193 NMVACGALIRPL-GTPKVAVKTENSTKLNKCSFLLSRIYECFELSLLTHRGFVTYAVAITFFNAG 256

  Fly   313 YFVPYVHMMQFVK-TTFPGEDVNLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLV 376
            ||:||||::...: ..|........:...|:...:||:..|..:|:..:..:::..:....:||.
Zfish   257 YFIPYVHLVAHSRHIGFTEYQAAFVISITGVADIVGRVASGWASDLGKIRLLHMLVVWTGLLGLS 321

  Fly   377 TLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPV 441
            .:|:|:...|..|:..::|.|...|....|...:..||.|......|:|.|..:.|....:|.|:
Zfish   322 LMLIPVAVVYAGLLLVSIVYGFCAGAMAPLAFAVVPEIVGIERVLGALGLLQLIESAGGLLGAPL 386

  Fly   442 AGMIFDSTNSYTLPLILAG----LPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIAGNG 502
            :|.:.|||.:||:..|.||    :..|:..:|.:...|        :||.|              
Zfish   387 SGWLKDSTGTYTVSFIAAGSFLMIGMLIAMTLPYFWSC--------TAPPA-------------- 429

  Fly   503 HYRSAGTKSSAPLMGATNGINGSAPAS----PTIQSNGHV 538
               .:.:|..:....|.:|:.|.:.:|    .|:.|..|:
Zfish   430 ---PSPSKKKSQEGSAEDGLIGESTSSNAINETLCSGDHI 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 102/386 (26%)
MFS_1 124..439 CDD:284993 84/323 (26%)
slc16a13XP_001920250.3 2A0111 11..443 CDD:331689 117/470 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100246
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.720

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