DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and Slc16a8

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_113932.2 Gene:Slc16a8 / 65200 RGDID:69282 Length:490 Species:Rattus norvegicus


Alignment Length:525 Identity:136/525 - (25%)
Similarity:225/525 - (42%) Gaps:66/525 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGT 134
            |..||||| ..|:|:.:.|:..|..:||.....|..     |..|.......|..|.:.::.:..
  Rat     9 GAGPPDGG-WGWVVLGACFVITGFAYGFPKAVSVFF-----RELKRDFGAGYSDTAWVSSIMLAM 67

  Fly   135 TFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTL 199
            .:....::..|..:.|.|....|||:|::.|::|:||.:..: .||.|.|::.|||.||.:.|:|
  Rat    68 LYGTGPLSSILVTRFGCRPVMLAGGLLASAGMILASFASRLL-ELYLTAGVLTGLGLALNFQPSL 131

  Fly   200 AILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGS-YGLEGTLRIMSLVSAFIILCSFVYK 263
            .:||.||:|.....:|...|||.||...|.| |.:|||. :|..|...:...:......|..|.:
  Rat   132 IMLGLYFERRRPLANGLAAAGSPVFLSTLSP-LGQLLGERFGWRGGFLLFGGLLLHCCACGAVMR 195

  Fly   264 PLHPPPEPPKKKP----GRSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQFV 324
            |  ||...|:..|    ||:|    .|.::::.:...:.|:::.:...|...|.|||.:.::.:.
  Rat   196 P--PPGPQPRPDPAPPGGRAR----HRQLLDLAVCTDRTFMVYMVTKFLMALGLFVPAILLVNYA 254

  Fly   325 KTT-FPGEDVNLPVMCIGITSGIGRLIFGVIADMPGVNRM-----YLQQLSLVSIGLVTLLLPLT 383
            |.. .|..:....:..:|....:.|...|.:|   |:.|:     ||..|:|::.||..|:....
  Rat   255 KDAGVPDAEAAFLLSIVGFVDIVARPACGALA---GLGRLRPHVPYLFSLALLANGLTDLISARA 316

  Fly   384 NSYVILVSFTLVMGLFDGCFISLLGPIAYEI----CGPSGATQAIGFLLGLSSIPLTVGPPVAGM 444
            .||..||:|.:..||..|    ::|.:.:|:    .|......|:|.:|.:.::.:.:|||.||.
  Rat   317 RSYGTLVAFCIAFGLSYG----MVGALQFEVLMATVGAPRFPSALGLVLLVEAVAVLIGPPSAGR 377

  Fly   445 IFDSTNSYTLPLILAGLPPLLGSSLLFLI-----KCVKEEENGVSAPRAVVLANGDIEIAGNGHY 504
            :.|:..:|.:...|||...:|....:.:.     :|.|:...|.|| ........|:|       
  Rat   378 LVDALKNYEIIFYLAGSEVVLAGVFMAVTTYCCQRCSKDIPPGPSA-EGGTSDTEDVE------- 434

  Fly   505 RSAGTKSSAPLMGATNGINGSAPASPTIQSNGHVDNGTGSYPDSPWPSPTRISDSAACDHSSSSL 569
               ..:.|.|:..:|.. .||..|...:....          .||.|....:.|   ..|.|...
  Rat   435 ---AERDSEPMPASTEE-PGSLEALEVLSPRA----------GSPEPEEEAVPD---LSHESVGG 482

  Fly   570 HTNPG 574
            |...|
  Rat   483 HEAHG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 105/392 (27%)
MFS_1 124..439 CDD:284993 88/329 (27%)
Slc16a8NP_113932.2 2A0113 14..440 CDD:273325 119/457 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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