DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slc16a4

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001074068.2 Gene:slc16a4 / 567144 ZFINID:ZDB-GENE-070112-602 Length:558 Species:Danio rerio


Alignment Length:542 Identity:122/542 - (22%)
Similarity:210/542 - (38%) Gaps:132/542 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 HANGKDAMKPSAPVQNGNGNANGTHIEAPCCRDIHGK------------EPPDGGARAWLVMVSA 87
            |::||.|..|                    |.::..|            |||||| ..|:|::..
Zfish     7 HSDGKTAKTP--------------------CSELKAKVMKKEKKKVVYREPPDGG-WGWMVVLHC 50

  Fly    88 FLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDKIGLR 152
            ||.|.::.|.:.|:|:....|.|   :.|.  :|...:.||::..........:|.....|:|.|
Zfish    51 FLVNVLVMGTLKTFGIFFVALQD---EFGG--SSESISWIGSIMSSLRLSGGPLASVACAKLGNR 110

  Fly   153 LTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILGHYFKRYLGKVSGFV 217
            :|:..|.:..:.|.|.|.|.| ::..||.:.|::.|||.||.|..|..::..||::.|.......
Zfish   111 VTSIVGALFVSAGFLFSIFAT-SVTYLYISMGLVVGLGFALLYQATSVVIVTYFRKRLATAYSIG 174

  Fly   218 TAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH---------------- 266
            .:|..: |..|.|....||..|..:|.|.|:..:...::....:.:|::                
Zfish   175 RSGMGL-TFALAPFTQLLLDQYAWQGALLILGGLMLNLVASGMLLRPINIRHPASPISNSTIHKT 238

  Fly   267 -------------------------PP------------------PEPPKKKP------------ 276
                                     ||                  |....|||            
Zfish   239 EKDPLKNNMNGNTPVANGTSKSDSSPPIHKDTLIIKNPVHEQNSLPHLDLKKPTQNGVNGTDSSQ 303

  Fly   277 --------GRSRINLFLRS------------IINVEIWKRKRFVIWALCVPLALFGYFVPYVHMM 321
                    |.|.::..|.:            :::..:.|...|.|:...:..:...||:||.|:.
Zfish   304 TKTSPEMNGVSPVDSLLENGRTENVPENSPKVLDFSLLKNPFFCIYTWSLVFSQLAYFIPYFHLS 368

  Fly   322 QFVKTT-FPGEDVNLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNS 385
            ...:.. ....|.:..:...|||..:.:|..|.:.|...|::.:..:..|:..|:|.||.||..|
Zfish   369 ARARNLGIDPMDASFIISVAGITETVAQLASGWVTDRNLVHKYHYHKAYLILCGVVNLLSPLATS 433

  Fly   386 YVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTN 450
            |::|:.:.:...:|.|.:::||.|:..::.|......::||.:....:....|||:||.::|.|.
Zfish   434 YILLMVYAVFFAIFCGGYMALLLPVLVDLVGADKLNNSMGFSMFFVGLGCLTGPPLAGFLYDYTQ 498

  Fly   451 SYTLPLILAGLPPLLGSSLLFL 472
            :|.....|||:..||.|..|||
Zfish   499 TYDCSFYLAGVCYLLSSISLFL 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 100/469 (21%)
MFS_1 124..439 CDD:284993 80/406 (20%)
slc16a4NP_001074068.2 2A0113 35..520 CDD:273325 113/492 (23%)
MFS 47..520 CDD:119392 105/479 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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