DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slc16a6a

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001243761.1 Gene:slc16a6a / 564872 ZFINID:ZDB-GENE-110208-1 Length:495 Species:Danio rerio


Alignment Length:456 Identity:101/456 - (22%)
Similarity:186/456 - (40%) Gaps:57/456 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            |.|||| ..|:|.|:.||.....:|.|.::|:   .|.|.::...  |.:|:.:.|.::.:....
Zfish    19 EVPDGG-WGWIVAVALFLVEVFTYGVIKSFGI---FLKDLMSDFN--ETNSRVSWIISICVFVMT 77

  Fly   137 LFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAI 201
            ..:.::..|:::.|.:.....||.|.:.|.:.::| |.:|..:|.|.||..|||..|.:.||..|
Zfish    78 FTAPLSTMLSNRFGFQPVVMFGGFLISLGTISTAF-TSSINQMYLTIGIATGLGYCLTFLPTATI 141

  Fly   202 LGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH 266
            |..||.|....|....:.|.|..|....|....|....|...||.::..:....|:|..:.:|:.
Zfish   142 LSQYFSRRRSVVMAMASTGESFATFAFAPAFTALKNYIGRRYTLVVIGTLQGITIICGALLRPIV 206

  Fly   267 PPP----EPPKK------------------------------KPG-------------RSRINLF 284
            ..|    |..:|                              |.|             :.:.|..
Zfish   207 IKPTSLTETEQKITYTLPVEQVQGFGSSGDSVVQSLEQEQGLKSGIELEEVEPVQINLKQQDNTS 271

  Fly   285 LRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQFVKTTFPGEDVNLPVMCI-GITSGIGR 348
            ...::::.:.|...|:.::.....|..|:|.|.:::::...:.....|....::.| .|:..|||
Zfish   272 KNRLLDLTVLKEGSFLCYSAFGLFATLGFFAPQLYVVELSASLGTERDKAAYMLSIMAISEIIGR 336

  Fly   349 LIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYE 413
            |..|.:.:...:.::::..:.:..:.||.:|..:.|.:..||...::.|...|...|...|:..|
Zfish   337 LSIGWVMNCGCIRKIFVLLICVSLMCLVLVLFTIVNGFWGLVVCCVLYGFLLGNITSTHIPMLAE 401

  Fly   414 --ICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIKCV 476
              :.|......|:|..:.:.|.....|||:.|::.|.|.:|:...........||:..|.|::..
Zfish   402 DDVVGIQRMPLAVGVYVCIQSFAGLAGPPLGGVLVDITQNYSAAFYSCAAGMGLGAIFLGLVRPA 466

  Fly   477 K 477
            |
Zfish   467 K 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 91/427 (21%)
MFS_1 124..439 CDD:284993 72/364 (20%)
slc16a6aNP_001243761.1 MFS 31..464 CDD:119392 93/438 (21%)
MFS_1 33..429 CDD:284993 81/401 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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